Waldek,

 

I finally got sklearn installed and got to the same issue you pointed out 
described here - https://github.com/cloudius-systems/osv/issues/1025

 

Has this been implemented yet?

 

Thanks,

 

Mike

 

From: [email protected] <[email protected]> On Behalf Of Waldek 
Kozaczuk
Sent: Tuesday, August 27, 2019 11:40 AM
To: OSv Development <[email protected]>
Subject: Re: [osv-dev] Re: Python 3 Scikitlearn

 

It looks like you have one of the libraries, 
libopenblasp-r0-2ecf47d5.3.7.dev.so 
<http://www.google.com/url?q=http%3A%2F%2Flibopenblasp-r0-2ecf47d5.3.7.dev.so&sa=D&sntz=1&usg=AFQjCNEzhQZhSHkxBkhVADvoaOnGZdTRaQ>
  depends on, missing.

 

You can use:

 

./scripts/manifest_from_host.sh -l 
/lib/python3.7/numpy/.libs/libopenblasp-r0-2ecf47d5.3.7.dev.so 
<http://www.google.com/url?q=http%3A%2F%2Flibopenblasp-r0-2ecf47d5.3.7.dev.so&sa=D&sntz=1&usg=AFQjCNEzhQZhSHkxBkhVADvoaOnGZdTRaQ>
 

 

to see which libraries have to be added.


On Tuesday, August 27, 2019 at 11:15:51 AM UTC-4, Michael De Lucia wrote:

Hi Waldek,

 

No that does not seem to be the problem. I started with just trying to see with 
numpy first, since that is a dependency. Here is what I did. I used your docker 
image build on Fedora29, which does a git and pulls down the OSv repo. Then I 
built the python3x osv-app in osv-apps/python3x/ on the github repo.

 

I have python 3.7 installed on the fedora29 image and did pip3 install numpy to 
get that installed in my python 3.7 environment. I modified the GET file under 
the python3x directory to include the numpy module.

 

Next I ran ./scripts/build image=python3x and the build completed successfully.

 

Then I ran ./scripts/run.py –api -e “/python3 -c \”import numpy; 
print(numpy.__version__)\””

 

That is when it failed in an unresolved symbol for blas_memory_alloc

 

[root@8ec8090052ab osv]# ./scripts/run.py --api -e "/python3 -c \"import numpy; 
print(numpy.__version__)\""

OSv v0.53.0-74-gef56fde7

eth0: 192.168.122.15

Booted up in 611.56 ms

/lib/python3.7/numpy/.libs/libopenblasp-r0-2ecf47d5.3.7.dev.so 
<http://www.google.com/url?q=http%3A%2F%2Flibopenblasp-r0-2ecf47d5.3.7.dev.so&sa=D&sntz=1&usg=AFQjCNEzhQZhSHkxBkhVADvoaOnGZdTRaQ>
 : failed looking up symbol blas_memory_alloc

 

[backtrace]

0x0000000040356209 <elf::object::symbol(unsigned int, bool)+969>

0x00000000403562cf <elf::object::resolve_pltgot(unsigned int)+127>

0x0000000040356494 <elf_resolve_pltgot+52>

0x000000004039b82f <???+1077524527>

0x000020000077ff6f <???+7864175>

0x0000000000000003 <???+3>

 

Any ideas on how to resolve this?

 

Thanks,

 

Mike

 

From: [email protected] <javascript:>  <[email protected] 
<javascript:> > On Behalf Of Waldek Kozaczuk
Sent: Monday, August 26, 2019 6:03 PM
To: OSv Development <[email protected] <javascript:> >
Subject: Re: [osv-dev] Re: Python 3 Scikitlearn

 

Is it possibly the same issue as described here - 
https://github.com/cloudius-systems/osv/issues/1025?

On Wednesday, August 21, 2019 at 10:08:15 PM UTC-4, Michael De Lucia wrote:

I Waldek,

 

I will get the exact command and stack trace to you on Friday.

 

Thanks,

 

Mike

Sent from my iPhone


On Aug 21, 2019, at 9:39 PM, Waldek Kozaczuk <[email protected] 
<mailto:[email protected]> > wrote:

Hi,

 

Can you provide exact build command you used to build the image? Also, can you 
provide the exact stack trace so we know which symbol is was unresolved?

 

Thanks,

Waldek

On Wednesday, August 21, 2019 at 9:19:36 PM UTC-4, [email protected] 
<http://gmail.com>  wrote:

Hi,

 

I tried to use the OSv app for python 3 support. I built the image with the 
system installed python 3 version. I also installed scikit learn and added that 
to the modules to keep from the site packages. Scikit also relies on numpy and 
scipy. However, I got it to import and build an image. But when I tried to run 
it, failed with an unresolved symbol. I have a centos system and was building 
within the docker container fedora 29 template. Any suggestions or thoughts on 
why this would fail?

 

Thanks,

 

Mike

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