-------------------------------------------------------------------------------- Fedora Update Notification FEDORA-2025-93f86165b0 2025-05-14 02:28:39.899032+00:00 --------------------------------------------------------------------------------
Name : python-probeinterface Product : Fedora 42 Version : 0.2.28 Release : 1.fc42 URL : https://github.com/SpikeInterface/probeinterface Summary : Handles probe layout, geometry, and wiring to device Description : A Python package to handle the layout, geometry, and wiring of silicon probes for extracellular electrophysiology experiments. Goals Make a lightweight package to handle: ⢠probe contact geometry (both 2D and 3D layouts) ⢠probe shape (contour of the probe, shape of channel contact, â¦) ⢠probe wiring to device (the physical layout often doesnât match the channel ordering) ⢠combining several probes into a device with global geometry + global wiring ⢠exporting probe geometry data into JSON files ⢠loading existing probe geometry files (Neuronexus, imec, Cambridge Neurotechâ¦) Started here Bonus: ⢠optional plotting (based on matplotlib) ⢠load/save geometry using common formats (PRB, CSV, NWB, â¦) ⢠handle SI length units correctly um/mm/⦠Target users/project: ⢠spikeinterface team: integrate this into spikeextractor for channel location ⢠neo team: handle array_annotations for AnalogSignal ⢠spikeforest team: use this package for plotting probe activity ⢠phy team: integrate for probe display ⢠spyking-circus team: handle probe with this package ⢠kilosort team: handle probe with this package ⢠tridesclous team: handle probe with this package ⢠open ephys team: automatically generate channel map configuration files -------------------------------------------------------------------------------- Update Information: probeinterface 0.2.28 May 5th, 2025 Packaging Fix hatchling packaging probeinterface 0.2.27 (broken) May 5th, 2025 Features Refactor Open Ephys for better readability Patch to support Quad-Base naming in read_openephys Allow plot_probe not to plot on axes, but just return polycollections Docs Add wiring reference for ASSY-77>Adpt.A64-Om32_2x-sm- cambridgeneurotech>two_RHD2132 Update link in README Packaging Change build to hatchling (#335) -------------------------------------------------------------------------------- ChangeLog: * Mon May 5 2025 Benjamin A. Beasley <[email protected]> - 0.2.28-1 - Update to 0.2.28 (close RHBZ#2364054) * Mon May 5 2025 Benjamin A. Beasley <[email protected]> - 0.2.27-1 - Update to 0.2.27 (close RHBZ#2364031) * Mon May 5 2025 Benjamin A. Beasley <[email protected]> - 0.2.26-3 - F41+: Use the provisional pyproject declarative buildsystem -------------------------------------------------------------------------------- References: [ 1 ] Bug #2364031 - python-probeinterface-0.2.27 is available https://bugzilla.redhat.com/show_bug.cgi?id=2364031 [ 2 ] Bug #2364054 - python-probeinterface-0.2.28 is available https://bugzilla.redhat.com/show_bug.cgi?id=2364054 -------------------------------------------------------------------------------- This update can be installed with the "dnf" update program. Use su -c 'dnf upgrade --advisory FEDORA-2025-93f86165b0' at the command line. For more information, refer to the dnf documentation available at http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label All packages are signed with the Fedora Project GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys --------------------------------------------------------------------------------
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