-------------------------------------------------------------------------------- Fedora Update Notification FEDORA-2026-3260bc5d33 2026-02-15 01:10:21.966741+00:00 --------------------------------------------------------------------------------
Name : snakemake Product : Fedora 43 Version : 9.16.3 Release : 1.fc43 URL : https://snakemake.readthedocs.io/en/stable/index.html Summary : Workflow management system to create reproducible and scalable data analyses Description : The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Workflows are described via a human readable, Python based language. They can be seamlessly scaled to server, cluster, grid and cloud environments, without the need to modify the workflow definition. Finally, Snakemake workflows can entail a description of required software, which will be automatically deployed to any execution environment. -------------------------------------------------------------------------------- Update Information: 9.16.3 (2026-02-05) Bug Fixes standardize handling of resources 9.16.2 (2026-01-29) Bug Fixes handle str input in fmt_iofile 9.16.1 (2026-01-29) Bug Fixes do not decompress source files during caching, keep them unchanged instead 9.16.0 (2026-01-27) Features add highlighting of selected view to HTML reports 9.15.0 (2026-01-21) Features expose logger plugin handlers via get_log_handlers() method Bug Fixes catch OSError raised during benchmarking (e.g. when too many proc files are opened in highly parallel environments ensure that fetching of remote git repo updates properly handles commit ids 9.14.8 (2026-01-16) Bug Fixes ensure that git repos backing source files are fetched only once per run Reverts Config validation skip for remote jobs Documentation Use snakemake logo as favicon 9.14.7 (2026-01-15) Bug Fixes report psutil errors in case benchmark fails reuse async runner to prevent port exhaustion -------------------------------------------------------------------------------- ChangeLog: * Fri Feb 6 2026 Benjamin A. Beasley <[email protected]> - 9.16.3-1 - Update to 9.16.3 (close RHBZ#2437212) * Thu Jan 29 2026 Benjamin A. Beasley <[email protected]> - 9.16.2-1 - Update to 9.16.2 (close RHBZ#2435340) * Wed Jan 28 2026 Benjamin A. Beasley <[email protected]> - 9.16.0-1 - Update to 9.16.0 (close RHBZ#2433765) * Wed Jan 21 2026 Benjamin A. Beasley <[email protected]> - 9.15.0-1 - Update to 9.15.0 (close RHBZ#2431519) * Fri Jan 16 2026 Benjamin A. Beasley <[email protected]> - 9.14.8-1 - Update to 9.14.8 (close RHBZ#2430394) * Fri Jan 16 2026 Benjamin A. Beasley <[email protected]> - 9.14.7-1 - Update to 9.14.7 (close RHBZ#2430197) -------------------------------------------------------------------------------- References: [ 1 ] Bug #2430197 - snakemake-9.14.7 is available https://bugzilla.redhat.com/show_bug.cgi?id=2430197 [ 2 ] Bug #2430394 - snakemake-9.14.8 is available https://bugzilla.redhat.com/show_bug.cgi?id=2430394 [ 3 ] Bug #2431519 - snakemake-9.15.0 is available https://bugzilla.redhat.com/show_bug.cgi?id=2431519 [ 4 ] Bug #2433765 - snakemake-9.16.0 is available https://bugzilla.redhat.com/show_bug.cgi?id=2433765 [ 5 ] Bug #2435340 - snakemake-9.16.2 is available https://bugzilla.redhat.com/show_bug.cgi?id=2435340 [ 6 ] Bug #2437212 - snakemake-9.16.3 is available https://bugzilla.redhat.com/show_bug.cgi?id=2437212 -------------------------------------------------------------------------------- This update can be installed with the "dnf" update program. Use su -c 'dnf upgrade --advisory FEDORA-2026-3260bc5d33' at the command line. For more information, refer to the dnf documentation available at http://dnf.readthedocs.io/en/latest/command_ref.html#upgrade-command-label All packages are signed with the Fedora Project GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys -------------------------------------------------------------------------------- -- _______________________________________________ package-announce mailing list -- [email protected] To unsubscribe send an email to [email protected] Fedora Code of Conduct: https://docs.fedoraproject.org/en-US/project/code-of-conduct/ List Guidelines: https://fedoraproject.org/wiki/Mailing_list_guidelines List Archives: https://lists.fedoraproject.org/archives/list/[email protected] Do not reply to spam, report it: https://forge.fedoraproject.org/infra/tickets/issues/new
