-------------------------------------------------------------------------------- Fedora Update Notification FEDORA-2013-5860 2013-04-17 16:03:47 --------------------------------------------------------------------------------
Name : R-biomaRt Product : Fedora 19 Version : 2.16.0 Release : 1.fc19 URL : http://www.bioconductor.org/packages/release/bioc/html/biomaRt.html Summary : R Interface to BioMart databases Description : In recent years a wealth of biological data has become available in public data repositories. Easy access to these valuable data resources and firm integration with data analysis is needed for comprehensive bioinformatics data analysis. biomaRt provides an interface to a growing collection of databases implementing the BioMart software suite (http://www.biomart.org). The package enables retrieval of large amounts of data in a uniform way without the need to know the underlying database schemas or write complex SQL queries. Examples of BioMart databases are Ensembl, COSMIC, Uniprot, HGNC, Gramene, Wormbase and dbSNP mapped to Ensembl. These major databases give biomaRt users direct access to a diverse set of data and enable a wide range of powerful online queries from gene annotation to database mining. -------------------------------------------------------------------------------- Update Information: Update R to 3.0.0. This required a rebuild of all R modules and R dependent packages. Because of the intrusive nature of this particular R update, it is not planned for any releases of Fedora older than Fedora 19. -------------------------------------------------------------------------------- References: [ 1 ] Bug #948083 - R-2.15.2-3 has a bug in kmeans https://bugzilla.redhat.com/show_bug.cgi?id=948083 -------------------------------------------------------------------------------- This update can be installed with the "yum" update program. Use su -c 'yum update R-biomaRt' at the command line. For more information, refer to "Managing Software with yum", available at http://docs.fedoraproject.org/yum/. All packages are signed with the Fedora Project GPG key. More details on the GPG keys used by the Fedora Project can be found at https://fedoraproject.org/keys -------------------------------------------------------------------------------- _______________________________________________ package-announce mailing list [email protected] https://admin.fedoraproject.org/mailman/listinfo/package-announce
