On 15-04-15 09:34 AM, Giuseppe Aprea wrote:
Hi all,
I would like to ask you, please, some help in using parallel with
blast alignment software.
I am trying to use GNU parallel v. 20150122 with blast for a very
large sequences alignment. I am using Parallel on a cluster which uses
LSF as queue system.
Hello Giuseppe,
I am an avid LSF user, and I want to use GNU Parallel to dispatch jobs
to LSF. Could you please explain a little bit to me how GNU Parallel
works with LSF? I do not see it in the on-line tutorials. For example, I
would like to understand how to pass "bsub" options like -oo, -q
queue_name, etc. to LSF from GNU Parallel.
Thanks,
Martin
