Hi, You need to need to do a clean build with VTK_USE_SYSTEM_HDF5 turned on and set to the hdf5 you used to build silo with.
On Thu, Apr 7, 2011 at 1:59 PM, Cook, Rich <[email protected]> wrote: > Hi, > I'm making some progress, but now I'm stuck on including the visit silo > reader. Our silo library seems to depend on HDF5. > > If I set the following variables: > VISIT_BUILD_READER_Silo:BOOL=ON > SILO_INCLUDE_DIR:PATH=/usr/gapps/visit/silo/4.8/linux-x86_64_gcc-4.1/include > SILO_LIBRARY:FILEPATH=/usr/gapps/visit/silo/4.8/linux-x86_64_gcc-4.1/lib/libsiloh5.a > > then the linker fails with some HDF5 unresolved symbols in libsiloh5.a. What > I'd like to do is add -L/usr/gapps/visit/hdf5/1.8.4/linux-x86_64_gcc-4.1/lib > -lhdf5 to the link flags but I cannot find a place to add these. I tried the > following: > > CMAKE_EXE_LINKER_FLAGS:STRING= > -L/usr/global/tools/Kitware/Paraview/3.10/chaos_4_x86_64_ib/lib > -L/usr/gapps/visit/mili/1.10.0/linux-x86_64_gcc-4.1/lib -lmili > /usr/gapps/visit/hdf5/1.8.4/linux-x86_64_gcc-4.1/lib/libhdf5.so > > however, this gives me a mysterious error > > [ 1%] Generating ../H5lib_settings.c > cd > /nfs/tmp2/rcook/Paraview/3.10/build/ParaView-3.10.0/build/VTK/Utilities/vtkhdf5/src > && ../../../../bin/H5make_libsettings > > /nfs/tmp2/rcook/Paraview/3.10/build/ParaView-3.10.0/build/VTK/Utilities/vtkhdf5/H5lib_settings.c > ../../../../bin/H5make_libsettings: error while loading shared libraries: > libhdf5.so.6: cannot open shared object file: No such file or directory > make[2]: *** [VTK/Utilities/vtkhdf5/H5lib_settings.c] Error 127 > > I assume this is a conflict between the internal HDF5 support in Paraview and > the HDF5 that our silo library was compiled against. I am not a silo or hdf5 > expert. Can someone help me untangle this? Thanks! > > -- > ✐Richard Cook > ✇ Lawrence Livermore National Laboratory > Bldg-453 Rm-4024, Mail Stop L-557 > 7000 East Avenue, Livermore, CA, 94550, USA > ☎ (office) (925) 423-9605 > ☎ (fax) (925) 423-6961 > --- > Information Management & Graphics Grp., Services & Development Div., > Integrated Computing & Communications Dept. > (opinions expressed herein are mine and not those of LLNL) > > > > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Please keep messages on-topic and check the ParaView Wiki at: > http://paraview.org/Wiki/ParaView > > Follow this link to subscribe/unsubscribe: > http://www.paraview.org/mailman/listinfo/paraview > -- Robert Maynard _______________________________________________ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Follow this link to subscribe/unsubscribe: http://www.paraview.org/mailman/listinfo/paraview
