Hi Rich, I am currently working on fixing the issues with the MILI reader not compiling correctly.
On Fri, Apr 8, 2011 at 1:15 PM, Cook, Rich <[email protected]> wrote: > Aha, it's the semicolon syntax that was unknown to me. Thanks. > I do want to reiterate that turning on the MILI reader did not result in a > successful reader build, because the include and library settings do not get > placed in the right makefiles. I have to manually hack the link.txt and > make.flags files or otherwise do workarounds for that. As long as I'm doing > that anyhow, I can just place the deeper dependencies there as well. > On Apr 8, 2011, at 6:26 AM, David Partyka wrote: > > Hi Rich, > Because you're building static you need to tell CMake what your > Silo/Mili/HDF5 dependencies are because it has no way of knowing. To do > this, in ccmake/cmake-gui you can list them in the same variables where you > specified SILO_LIBRARY,MILI_LIBRARY, HDF5_LIBRARY/HDF5_LIBRARIES. This > should give CMake enough information to compute the correct link line. > For example, you should be able to set these in ccmake/cmake-gui like so: > SILO_LIBRARY /usr/gapps/visit/silo/4.8/linux-x86_64_gcc-4.1/lib/libsiloh5.a;/usr/gapps/visit/szip/2.1/linux-x86_64_gcc-4.1/lib/libsz.a > On Thu, Apr 7, 2011 at 7:19 PM, Cook, Rich <[email protected]> wrote: >> >> OK, I just solved this by hacking into all the link.txt files I found >> laying around. This has been one ugly build process! >> -- Rich >> >> On Apr 7, 2011, at 4:00 PM, Cook, Rich wrote: >> >> > So, our libmili.a, libsiloh5.a and libhdf5.a libraries have dependencies >> > on another library, libsz. I've tried adding -lz >> > /usr/gapps/visit/szip/2.1/linux-x86_64_gcc-4.1/lib/libsz.a to every >> > STRING >> > I can in the CMakeCache.txt file, but I'm stuck on this error. How can I >> > append linker flags to what cmake is doing here? You can see that the -lz >> > and libsz.a are being inserted here, but it needs to come at the end of the >> > link line to resolve the symbols. I might resort to sed and grep if this >> > keeps up, but I hope I don't have to. >> > >> > >> > Linking CXX executable ../../../../bin/ServerManagerStateLoader >> > cd >> > /nfs/tmp2/rcook/Paraview/3.10/build/ParaView-3.10.0/build/Servers/ServerManager/Testing/Cxx >> > && /usr/gapps/visit/cmake/2.8.3/linux-x86_64_gcc-4.1/bin/cmake -E >> > cmake_link_script CMakeFiles/ServerManagerStateLoader.dir/link.txt >> > --verbose=1 >> > /usr/local/bin/g++ >> > -I/usr/global/tools/Kitware/Paraview/3.10/chaos_4_x86_64_ib/include >> > -I/usr/gapps/visit/mili/1.10.0/linux-x86_64_gcc-4.1/include >> > -Wno-deprecated -g >> > -L/usr/global/tools/Kitware/Paraview/3.10/chaos_4_x86_64_ib/lib >> > -L/usr/gapps/visit/mili/1.10.0/linux-x86_64_gcc-4.1/lib -lmili >> > /usr/gapps/visit/hdf5/1.8.4/linux-x86_64_gcc-4.1/lib/libhdf5.a -lz >> > /usr/gapps/visit/szip/2.1/linux-x86_64_gcc-4.1/lib/libsz.a >> > CMakeFiles/ServerManagerStateLoader.dir/ServerManagerStateLoader.cxx.o >> > CMakeFiles/ServerManagerStateLoader.dir/vtkTestingProcessModuleGUIHelper.cxx.o >> > CMakeFiles/ServerManagerStateLoader.dir/vtkTestingOptions.cxx.o -o >> > ../../../../bin/ServerManagerStateLoader -rdynamic >> > ../../../../bin/libvtkPVServerManager.a ../../../../bin/libvtkPVFiltersCS.a >> > ../../../../bin/libvtkPVFilters.a ../../../../bin/libvtkPVServerCommonCS.a >> > ../../../../bin/libvtkPVServerCommon.a >> > ../../../../bin/libvtkPVCommandOptions.a ../../../../bin/libvtkChartsCS.a >> > ../../../../bin/libvtkViewsCS.a ../../../../bin/libvtkInfovisCS.a >> > ../../../../bin/libQVTK.a >> > /usr/global/tools/Kitware/Paraview/3.10/chaos_4_x86_64_ib/lib/libQtWebKit.so >> > /usr/global/tools/Kitware/Paraview/3.10/chaos_4_x86_64_ib/lib/libQtXmlPatterns.so >> > /usr/global/tools/Kitware/Paraview/3.10/chaos_4_x86_64_ib/lib/libQtNetwork.so >> > ../../../../bin/libIceTMPI.a ../../../../bin/libIceTGL.a >> > ../../../../bin/libIceTCore.a -lGLU >> > ../../../../bin/libvtkVolumeRenderingCS.a >> > ../../../../bin/libvtkVolumeRendering.a ../../../../bin/libvtkWidgetsCS.a >> > ../../../../bin/libKWCommon.a ../../../../bin/libvtkCharts.a >> > ../../../../bin/libvtkViews.a ../../../../bin/libvtkInfovis.a >> > ../../../../bin/libvtkWidgets.a ../../../../bin/libvtkalglib.a >> > ../../../../bin/libvtkXdmfCS.a ../../../../bin/libvtkXdmf.a >> > ../../../../bin/libXdmf.a ../../../../bin/libvtklibxml2.a -lm >> > ../../../../bin/libvtkVisItDatabasesCS.a >> > ../../../../bin/libvtkVisItAVTAlgorithmsCS.a >> > ../../../../bin/libvtkHybridCS.a ../../../../bin/libvtkParallelCS.a >> > ../../../../bin/libvtkHybrid.a ../../../../bin/libvtkParallel.a >> > ../../../../bin/libVPIC.a ../../../../bin/libCosmo.a >> > /usr/local/tools/mvapich-gnu/lib/shared/libmpich.so >> > ../../../../bin/libvtkexoIIc.a ../../../../bin/libvtkRenderingCS.a >> > ../../../../bin/libvtkRendering.a ../../../../bin/libvtkftgl.a >> > /usr/global/tools/Kitware/Paraview/3.10/chaos_4_x86_64_ib/lib/libQtGui.so >> > /usr/global/tools/Kitware/Paraview/3.10/chaos_4_x86_64_ib/lib/libQtSql.so >> > /usr/global/tools/Kitware/Paraview/3.10/chaos_4_x86_64_ib/lib/libQtCore.so >> > -lGL ../../../../bin/libvtkfreetype.a -lXt -lSM -lICE -lX11 -lXext >> > ../../../../bin/libvtkGenericFilteringCS.a >> > ../../../../bin/libvtkGenericFiltering.a ../../../../bin/libvtkGraphicsCS.a >> > ../../../../bin/libvtkImagingCS.a ../../../../bin/libvtkIOCS.a >> > ../../../../bin/libvtkFilteringCS.a ../../../../bin/libvtkCommonCS.a >> > ../../../../bin/libvtkClientServer.a ../../../../bin/libvtkVisItDatabases.a >> > ../../../../bin/libvtkVisItAVTAlgorithms.a >> > ../../../../bin/libavtdatabase_par.a ../../../../bin/libavtpipeline_par.a >> > ../../../../bin/libavtdbatts.a ../../../../bin/libavtivp.a >> > ../../../../bin/libvisit_vtk.a ../../../../bin/libvtkGraphics.a >> > ../../../../bin/libvtkverdict.a ../../../../bin/libvtkImaging.a >> > ../../../../bin/liblightweight_visit_vtk.a ../../../../bin/libvtkIO.a >> > ../../../../bin/libvtkDICOMParser.a ../../../../bin/libvtkNetCDF_cxx.a >> > ../../../../bin/libvtkmetaio.a ../../../../bin/libvtksqlite.a >> > ../../../../bin/libvtkpng.a ../../../../bin/libvtktiff.a >> > ../../../../bin/libvtkzlib.a ../../../../bin/libvtkjpeg.a >> > ../../../../bin/libvtkexpat.a ../../../../bin/libvtkFiltering.a >> > ../../../../bin/libavtmath.a ../../../../bin/libvtkCommon.a >> > ../../../../bin/libvtksys.a -lm -lpthread -lz >> > /usr/gapps/visit/szip/2.1/linux-x86_64_gcc-4.1/lib/libsz.a -ldl >> > ../../../../bin/libvisitcommon.a ../../../../bin/libvtkNetCDF.a >> > /usr/gapps/visit/hdf5/1.8.4/linux-x86_64_gcc-4.1/lib/libhdf5.a >> > /usr/gapps/visit/silo/4.8/linux-x86_64_gcc-4.1/lib/libsiloh5.a >> > /usr/gapps/visit/cgns/3.0.8/linux-x86_64_gcc-4.1/lib/libcgns.a >> > /usr/gapps/visit/mili/1.10.0/linux-x86_64_gcc-4.1/lib/libmili.a >> > -Wl,-rpath,/usr/global/tools/Kitware/Paraview/3.10/chaos_4_x86_64_ib/lib:/usr/local/tools/mvapich-gnu/lib/shared >> > /usr/gapps/visit/hdf5/1.8.4/linux-x86_64_gcc-4.1/lib/libhdf5.a(H5Z.o): >> > In function `H5Z_init_interface': >> > H5Z.c:(.text+0x27d): undefined reference to `SZ_encoder_enabled' >> > >> > /usr/gapps/visit/hdf5/1.8.4/linux-x86_64_gcc-4.1/lib/libhdf5.a(H5Zszip.o): >> > In function `H5Z_filter_szip': >> > H5Zszip.c:(.text+0x121): undefined reference to >> > `SZ_BufftoBuffDecompress' >> > H5Zszip.c:(.text+0x1ce): undefined reference to `SZ_BufftoBuffCompress' >> > >> > /usr/gapps/visit/silo/4.8/linux-x86_64_gcc-4.1/lib/libsiloh5.a(silo_hdf5.o): >> > In function `db_hdf5_InqMeshName': >> > silo_hdf5.c:(.text+0x839e): undefined reference to `H5Topen1' >> > >> > /usr/gapps/visit/silo/4.8/linux-x86_64_gcc-4.1/lib/libsiloh5.a(silo_hdf5.o): >> > In function `db_hdf5_hdrwr': >> > >> > -- >> > ✐Richard Cook >> > ✇ Lawrence Livermore National Laboratory >> > Bldg-453 Rm-4024, Mail Stop L-557 >> > 7000 East Avenue, Livermore, CA, 94550, USA >> > ☎ (office) (925) 423-9605 >> > ☎ (fax) (925) 423-6961 >> > --- >> > Information Management & Graphics Grp., Services & Development Div., >> > Integrated Computing & Communications Dept. >> > (opinions expressed herein are mine and not those of LLNL) >> > >> > >> > >> > _______________________________________________ >> > Powered by www.kitware.com >> > >> > Visit other Kitware open-source projects at >> > http://www.kitware.com/opensource/opensource.html >> > >> > Please keep messages on-topic and check the ParaView Wiki at: >> > http://paraview.org/Wiki/ParaView >> > >> > Follow this link to subscribe/unsubscribe: >> > http://www.paraview.org/mailman/listinfo/paraview >> >> -- >> ✐Richard Cook >> ✇ Lawrence Livermore National Laboratory >> Bldg-453 Rm-4024, Mail Stop L-557 >> 7000 East Avenue, Livermore, CA, 94550, USA >> ☎ (office) (925) 423-9605 >> ☎ (fax) (925) 423-6961 >> --- >> Information Management & Graphics Grp., Services & Development Div., >> Integrated Computing & Communications Dept. >> (opinions expressed herein are mine and not those of LLNL) >> >> >> >> _______________________________________________ >> Powered by www.kitware.com >> >> Visit other Kitware open-source projects at >> http://www.kitware.com/opensource/opensource.html >> >> Please keep messages on-topic and check the ParaView Wiki at: >> http://paraview.org/Wiki/ParaView >> >> Follow this link to subscribe/unsubscribe: >> http://www.paraview.org/mailman/listinfo/paraview > > > -- > ✐Richard Cook > ✇ Lawrence Livermore National Laboratory > Bldg-453 Rm-4024, Mail Stop L-557 > 7000 East Avenue, Livermore, CA, 94550, USA > ☎ (office) (925) 423-9605 > ☎ (fax) (925) 423-6961 > --- > Information Management & Graphics Grp., Services & Development Div., > Integrated Computing & Communications Dept. > (opinions expressed herein are mine and not those of LLNL) > > > > _______________________________________________ > Powered by www.kitware.com > > Visit other Kitware open-source projects at > http://www.kitware.com/opensource/opensource.html > > Please keep messages on-topic and check the ParaView Wiki at: > http://paraview.org/Wiki/ParaView > > Follow this link to subscribe/unsubscribe: > http://www.paraview.org/mailman/listinfo/paraview > > -- Robert Maynard _______________________________________________ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages on-topic and check the ParaView Wiki at: http://paraview.org/Wiki/ParaView Follow this link to subscribe/unsubscribe: http://www.paraview.org/mailman/listinfo/paraview
