PS In the previous 'bean' example, abduction is not given as felicitously
as it might be. But this is a tricky matter which I'll try to get back
to ed at a later date. GR

*Gary Richmond*
*Philosophy and Critical Thinking*
*Communication Studies*
*LaGuardia College of the City University of New York*
*C 745*
*718 482-5690*


On Thu, Aug 21, 2014 at 11:21 PM, Gary Richmond <[email protected]>
wrote:

> Helmut, lists,
>
> Since I've been a little out of the loop, for now I'll only add a couple
> of things..
>
> 1st, in consideration of the categorial path (vectorial movement) of the
> three inference patterns as given in the famous bean example (3ns being
> 'rule', 2ns being 'case', 1ns being 'qualitative result':
>
> Deduction: rule (3ns) -> case (2ns) -> qualitative result (1ns)
> All the beans from this bag are exactly1/2 black, 1/2 white; these beans
> are from this bag; therefore, these beans will necessarily be exactly1/2
> black and 1/2 white.
>
> Induction: case (2ns) -> quality (1ns) -> rule (3ns)
> These beans are from this bag, they turn out to be (approximately) 1/2
> black and 1/2 white, so, beans from this back will tend to be
> (approximately) 1/2 black and 1/2 white.
>
> Abduction (retroduction == inference from result to case): rule (3ns) ->
> quality (1ns) -> case (2ns).
> One may hypothesize that if these beans found on the table are1/2 black
> and 1/2 white that they might well be from this bag, these beans turn out
> to be 1/2 black and 1/2 white; so beans taken from this bag may well be
> from this bag.
>
> Also, in terms of inquiry as well as biological evolution, Peirce argues
> that the vectorial progress is from 1ns through 3ns to 2ns (note: therefore
> NOT following the Hegelian order of 1ns -> 2ns -> 3ns). So:
>
> Biological evolution:
> Chance sporting (1ns) -> new habit taking (3ns) -> evolutionary
> change--say, structural change (2ns).
>
> vectorially like:
>
> Inquiry:
> Abduction, or, hypothesis formation (1ns) -> Deduction, or, what would
> necessarily follow (for the purpose of devising tests) should the
> hypothesis be valid (3ns) -> Induction, the actual testing of the
> hypothesis to see the extent to which the hypothesis conforms with reality.
>
> There are, of course, 5 other paths through the categories, all of which
> Peirce exploits.
>
> Best,
>
>  Gary
>
>
>
>
> *Gary Richmond*
> *Philosophy and Critical Thinking*
> *Communication Studies*
> *LaGuardia College of the City University of New York*
> *C 745*
> *718 482-5690 <718%20482-5690>*
>
>
> On Thu, Aug 21, 2014 at 5:40 PM, Helmut Raulien <[email protected]> wrote:
>
>>
>> 2nd supplement: I think, between the two kinds of induction I mentioned (
>> false and real, I would replace with abductive and deductive ), there is a
>> third kind, that is, when you know , that the number of elements in the
>> object set is limited, but you dont know the number. That would be
>> inductive induction. Is this weird? I am wondering, why the thread stops,
>> just when it is getting interesting. Or is there something wrong with my
>> style of communication, I mean am I rude? Dilettantic? Hard to understand?
>> Too easy to understand, but missing the point? Believe me, i dont have an
>> idea.
>>
>> Supplement: So, maybe my example was a "false", or "pseudo"- induction,
>> which in fact is an abduction. Maybe a "real" induction is only given, if
>> one knows the set, the extension of the dynamical object, which knowledge
>> makes able to tell the value of teh probability, and whith that to tell it
>> from possibility.
>>   Hi! I am sure, that deduction "is" thirdness, because it is obviously
>> an argument. Can induction be an argument too? No, because it has indexical
>> object relation, eg: "I have seen 342 white swans in my life, no swan of
>> other colour, so probably all swans are white": The 342 swans I have seen
>> are a subset of all swans there are in the universe. A subset relation is
>> an index, like spotted smoke is a subset of all smoking fires there are.
>> But a sign with an indexical object relation can not be an argument. It is
>> not even an argument about probability, because a premise is missing, that
>> is the number of existing swans. Without this premise you cannot even
>> distinguish probability from possibility, because what distiguishes both,
>> is the value of the probability.
>> Best, Helmut
>>
>>
>> *Von:* "Sungchul Ji" <[email protected]>
>>
>> (If Figure 1 is distorted, see the attached.)
>>
>> Stan, Mary, John, and list,
>>
>> We are dealing with three sets of three concepts distributed over a
>> diagram constrained by the mathematical concept of a category:
>>
>> 1) Possibility, Probability, Pattern.
>> 2) Firstness, Secondness, Thirdness,
>> 3) Abduction, Induction, Deduction.
>>
>> f g
>> A ------> B ------> C => T
>> | ^
>> | |
>> |______________________|
>> h
>>
>> Figure 1. The ur-category defined as a set of three nodes (A, B, & C) and
>> three edges (f, g & h) connected in such a manner as to satisfy the
>> composition condition, f x g = h, resulting in a function or a goal
>> achieved (to be designated as T from teleonomy). The symbol "=>" reads
>> "is associated with" or "leading to".
>>
>> The specific realizations of A, B, C, f, g, and h may be variable,
>> dependent on the nature of T. In other words, depending on T, one or more
>> of the following POSSIBILITIES or choices may be realized:
>>
>> I = f, g, - h (i.e., clockwise motion, - h being the reversal of h)
>> II = f, - h, -g
>> III = g, -h, f
>> IV = g, -f, h
>> V = -h, f, g
>> VI = h, -g, -f
>>
>> The degree of realizing any of the above 6 possibilities (which are
>> discrete or ’quantized’ ?) can be expressed in terms of PROBBILITIES
>> continuously changing from 0 to 1. Here is something not usually
>> discussed: Even within a given possibility with an average probability,
>> there can be many different PATTERNS of probability distributions (e.g.,
>> Poisson, Gaussian, ex-Gaussian, Gamma, etc) , each distribution being
>> associated with a specific function, a goal, or a meaning.
>>
>> It seems to me that there is no problem with the assignment of the first
>> two triads of concepts to the ur-category (i.e., A = Possibility =
>> Firstness; B = Probability = Secondness; C = Pattern = Thirdness) but
>> there are at least two different opinions on how to assign the third
>> triad (i.e., Abduction, Deduction, and Induction) to the ur-category:
>>
>> Sung: Choice I, i.e., A = Abduction; B =Induction; (6467-1)
>> C = Deduction
>>
>> John & Mary: Choice VI, i.e., A = Abduction; (6467-2)
>> B =Deduction; C = Induction
>>
>> Both these possibilities assume that Abduction is Firstness but differ in
>> the assignments of Induction and Deduction to Peircean categories of
>> Secondness and Thirdness:
>>
>> Sung: Induction = Secondness; Deduction = Thirdness (6467-3)
>>
>> John & Marty: Deduction = Secondness; Induction = Thirdness (6467-4)
>>
>> Can both (6467-3) and (6467-4) be right depending on T ?
>>
>> Can Peirce shed some light on this question ?
>>
>> Some of the above 6 possibilities may not be allowed (or may be forbidden)
>> by the laws of physics, chemistry, and/or biology.
>>
>> With all the best.
>>
>> Sung
>>
>>
>> > Mary -- Why is it necessary to place a starting point? Semiosis, as a
>> > natural process (as in BIOsemiotics), is 'all at once'. In my view it is
>> > best seen as a developmental cycle that cannot 'begin' at some point
>> > without starting up the whole thing, spontaneously (given the energy
>> > source).
>> >
>> > STAN
>> >
>> >
>> > On Tue, Aug 19, 2014 at 9:53 AM, Libertin, Mary <[email protected]>
>> wrote:
>> >
>> >> Dear John, list,
>> >>
>> >> I agree with your suggested order below. The order would not be the
>> >> previously suggested A-I-D (abduction, induction, deduction) but A-D-I
>> >> based on Peirce’s writings. I will need more time to gather together
>> >> all of the evidence, but Peirce’s essay, “A Neglected Argument for
>> >> the Reality of God,� presents the three stages. Deely’s explanation
>> >> of the three stages makes sense as a sequence (A-D-I). A-D-I makes
>> sense:
>> >> getting an idea in the first place, developing the consequences of an
>> >> idea, experimentally testing those consequences and, if necessary,
>> >> deciding how to reformulate the hypothesis (found in the original
>> >> abduction). I am rushed with the start of the semester and apologize
>> for
>> >> my haste.
>> >>
>> >> Cheers!
>> >> Mary Libertin
>> >>
>> >> From: <Deely>, "John N." <[email protected]>
>> >> Reply-To: "[email protected]" <[email protected]>
>> >> Date: Monday, August 18, 2014 at 3:31 PM
>> >> To: "[email protected]" <[email protected]>
>> >> Subject: [biosemiotics:6463] Re: Possibility, probability and pattern
>> >>
>> >> Abduction is getting an idea in the first place (also mis-called by
>> >> Peirce retroduction); deduction is developing the consequences of an
>> >> idea;
>> >> induction (ill-called by Peirce, better termed retroduction) is the
>> >> experimental testing of the consequences of an idea.
>> >>
>> >>
>> >>
>> >> *From:* Helmut Raulien [mailto:[email protected] <[email protected]>]
>> >> *Sent:* Monday, August 18, 2014 14:00
>> >> *To:* [email protected]
>> >> *Subject:* [biosemiotics:6462] Re: Possibility, probability and pattern
>> >>
>> >>
>> >>
>> >>
>> >>
>> >> Dear Sung, List,
>> >>
>> >> Maybe in the posts below you were right, and I was wrong (Sorry!):
>> >> Perhaps
>> >> Peirce has not definitely written, that abduction, induction, deduction
>> >> are
>> >> caterorically 1-2-3. Now I have written a chapter, in which I have
>> tried
>> >> to
>> >> show that they are. But Im afraid I first had to mor or less
>> >> hypothetically
>> >> reformulate the categories (in the other chapters), with which I think,
>> >> not
>> >> everybody would agree. See: www.signs-in-time.de , "English version",
>> >> "Abduction, induction, deduction". I hope, I have not mixed up the
>> beans
>> >> from the bag in my example.
>> >>
>> >> Very best,
>> >>
>> >> Helmut
>> >>
>> >>
>> >>
>> >> Hi Sung,
>> >>
>> >> no, that was not me, it was Peirce himself, with the example about the
>> >> beans in a bag, I think. Whose own writings I have read less than
>> >> receptions: The assignment to the categories I think I have gotten from
>> >> secondary literature by eg. Nina Ort "Reflexionslogische Semiotik"
>> >> (logic-of-reflection-semiotics?), Winfried Nöth, Helmut Pape,... But
>> >> thank
>> >> you for your (mis-) estimation!
>> >>
>> >> Very best,
>> >>
>> >> Helmut
>> >>
>> >> *Gesendet:* Sonntag, 17. August 2014 um 01:24 Uhr
>> >> *Von:* "Sungchul Ji" <[email protected]>
>> >> *An:* [email protected]
>> >> *Betreff:* [biosemiotics:6458] Re: Possibility, probability and pattern
>> >> may
>> >>
>> >> Hi Helmut,
>> >>
>> >> If you can demonstrate that the triad of abduction (A), induction (I)
>> >> and
>> >> deduction (D) constitutes a mathematical category, you will have a new
>> >> category which may be referred to as the AID category.
>> >>
>> >> As you indicated, A, I and D indeed seem to correspond to Firsrtness
>> >> (F),
>> >> Secondness (S), and Thridness (T), and, since the triad of F, S and T
>> is
>> >> a
>> >> mathemtical category (as I see it), you my have 'discovered' a new
>> >> mathemtical category -- the AID category !
>> >>
>> >> With all the best.
>> >>
>> >> Sung
>> >>
>> >>
>> >>
>> >> > Supplement: Abduction and induction are selections too, abduction is
>> >> > tentative or hypothetic selection, induction is reasonable selection,
>> >> > and deduction is definitely justified selection. Or something
>> >> > overprecise like that. But mathematically, I assume, because
>> >> > mathematics is exact science, selection is only done, if completely
>> >> > justified, therefore deduction, or total induction, but that is
>> >> > deduction, because completion is a new premise, that turns induction
>> >> > into deduction Hi Sung, the brain I dont have much of an idea of,
>> >> > but I agree with your classification, because possibility,
>> probability
>> >> > and pattern for me seem to be the grounds for abduction, induction
>> and
>> >> > deduction, which are categorically 1-2-3 either. To me it seems, that
>> >> > &quot;pattern&quot; fits better than &quot;selection&quot;, because
>> >> > &quot;pattern&quot; is the ground or reason of the inference, just
>> >> like
>> >> > &quot;possibility&quot; and &quot;probability&quot; are, while
>> >> > &quot;selection&quot; is the inference (deduction) itself. Best,
>> >> > Helmut
>> >> > Von: &quot;Sungchul Ji&quot;
>> >> > An: [email protected]
>> >> > Betreff: [biosemiotics:6454] Possibility, probability and pattern may
>> >> > form a mathematical category (If Figure 1 is distorted, see the
>> >> > attached.)
>> >> >
>> >> > Hi,
>> >> >
>> >> > While jogging along the Carnegie Lake in Princeton one morning
>> >> recently,
>> >> > a
>> >> > set of three concepts kept recurring in my mind &ndash; Possibility,
>> >> > Probability, and Selection -- which seemed to fit the Peircean
>> >> categories
>> >> > of Firstness, Secondness and Thirdness, except perhaps the last
>> >> category.
>> >> > But when I tried to represent this triad as a mathematical category,
>> a
>> >> > new
>> >> > triad emerged wherein Selection is replaced by Pattern which I think
>> >> fits
>> >> > the Peircean Thirdness better than Selection. For convenience, I will
>> >> > refer to this triad as the PPP category, which evidently satisfies
>> the
>> >> > composition condition, f x g = h:
>> >> > f g
>> >> > Possibility --------> Probability --------> Pattern
>> >> > (Firstness) (Secondness) (Thirdness)
>> >> > &#124; ^
>> >> > &#124; &#124;
>> >> > &#124;____________________________________________&#124;
>> >> > h
>> >> >
>> >> > Figure 1. The PPP-category. f = actualization; g = selection; h =
>> >> > validation, control or information flow.
>> >> >
>> >> > Out of many examples I have, let me present juts two that fit the PPP
>> >> > category:
>> >> >
>> >> > (1) There are several regions in the human brain (e.g., post and
>> >> anterior
>> >> > cingulated cortexes, ventral prefrontal cortex, hippocampus, and DMN,
>> >> > default mode network), each occupying an average volume of 50 -60
>> mm^3
>> >> or
>> >> > 1x10^6 mm^3, that exhibit fMRI signal changes (reflecting neuronal
>> >> > firing/metabolic activity changes) upon a venous infusion of the
>> >> > psychedelic drug, psilocybin. Thus, since the fMRI (functional
>> >> magnetic
>> >> > resonance imaging) technique allows neuroscientists to monitor the
>> >> > neuronal firing activities non-invasively from live brain volumes of
>> >> > about
>> >> > 10 mm^3 called &ldquo;voxels&rdquo; (volume elements), the fMRI
>> >> technique
>> >> > can monitor
>> >> > the neuronal firing activities of about 10^5 voxels in these brain
>> >> > regions. Carhart-Harris and his coworkers [1] recently found that the
>> >> > psilocybin infusion caused an increase in the variety (or entropy) of
>> >> the
>> >> > fMRI signals measured from DMN regions of human subject (see Figure 1
>> >> a)
>> >> > and b) attached). Psilocybin promotes unconstrained thinking
>> >> (&ldquo;My
>> >> > thoughts wandered freely&rdquo;) and decreases cerebral blood flow.
>> >> The
>> >> > term
>> >> > entropy used here simply means a quantitative measure of the variety
>> >> of
>> >> > the fMRI signals measured from a given brain regions calculated as
>> the
>> >> > variety of the distances of the local signals from the mean signal of
>> >> the
>> >> > brain region under investigation.
>> >> > Based on a visual inspection of Figures 1a) and b) attached [2], the
>> >> > following conclusions can be made:
>> >> >
>> >> > (a) Possibility = the number of voxels in a brain region, i.e., ~
>> 10^5
>> >> > voxels.
>> >> > (b) Probability = the probability of a given voxel exhibiting a fMRI
>> >> > signal that is 0.1 unit away from the group mean is about 0.1
>> >> > pre-psilocybin and 0 post-psilocybin. Likewise, the probability of a
>> >> > given voxel&rsquo;s fMRI signal deviating from the group mean by 0.4
>> >> > units is
>> >> > 0.15 pre-psilocybin and 0.2 post-psilocybin, etc.
>> >> > (c) Pattern = the fMRI signal distance frequency distribution fits
>> the
>> >> > Planckian distribution function reasonably well (see Figure 1a) and
>> >> b).
>> >> > Therefore, I conclude that the neurophysiology of the DMN (default
>> >> mode
>> >> > network) of the
>> >> > human brain can be represented as a mathematical category.
>> >> >
>> >> > (2) When DNA is fragmented into short segments, called n-mers, where
>> n
>> >> is
>> >> > the number of nucleotides in them, the maximum number of n-mers is
>> >> given
>> >> > by 4^n since there are 4 different nucleotides, G, C, A and T. Zhou
>> >> and
>> >> > Mishra [3] studied the frequency distributions of 11-mers. Not all
>> >> > 11-mers occurred equally &ndash; some (as distinguished by their
>> >> > nucleotide
>> >> > sequences) occurred only once, some occurred not at all, while still
>> >> > others occurred more than hundred times. From Figure 1c), we can see
>> >> > that the number of the 11-mers that occurred only once in the genome
>> >> is
>> >> > about 0.002 x 4,194,304 = 8,329, while the number of the 11-mers that
>> >> > occurred about 20 times in the genome numbered 0.025 x 4,194,304 =
>> >> > 104,858. As evident in Figure 1 c), the 11-mer frequency distribution
>> >> in
>> >> > the primitive unicellular organism, Pyrococcus abyssi, fits the
>> >> > Planckian distribution with a great precision and hence, the genome
>> of
>> >> > this organism can be considered as an example of the PPP category,
>> >> since
>> >> > (a) Possibility = 4^11 = 4,194,304 possible 11-mers
>> >> >
>> >> > (b) Probability = the probability of the 11-mers occurring only once
>> >> in
>> >> > the genome is about 0.002, while the probability of the 11-mers that
>> >> > occur
>> >> > 20 times in 0.0025.
>> >> >
>> >> > (c) Pattern = the11-mer frequency distribution fits the Planckian
>> >> > distribution function.
>> >> >
>> >> > It seems clear that the PPP category introduced above for the first
>> >> time
>> >> > is an example of the ur-category described in [biosemiotics:6360].
>> >> >
>> >> > With all the best.
>> >> >
>> >> > Sung
>> >> > __________________________________________________
>> >> > Sungchul Ji, Ph.D.
>> >> > Associate Professor of Pharmacology and Toxicology
>> >> > Department of Pharmacology and Toxicology
>> >> > Ernest Mario School of Pharmacy
>> >> > Rutgers University
>> >> > Piscataway, N.J. 08855
>> >> > 732-445-4701
>> >> >
>> >> > www.conformon.net
>> >> >
>> >> >
>> >> > Reference:
>> >> > [1] Carhart-Harris, R. L. et al. (2014). The entropic brain: a theory
>> >> > of conscious states informed by neuroimaging research with
>> psychedelic
>> >> > drugs. Frontiers in Human Neuroscience 8(Article 20): 1-22.
>> >> > [2] Ji, S. (2014). Planckian and Gaussian distributions in Molecular
>> >> > Machines and Living Cells: Evidence of Free Energy Quantization in
>> >> > Biology. Computational and Structural Biotechnology Journal (to
>> >> > appear).
>> >> > [3] Zhou, Y. and Mishra, B. (2004). Models of Genome Evolution. In:
>> >> > Modeling in Molecular Biology (Ciobanu G, Rozenberg G, eds),
>> Springer,
>> >> > Berlin. Pp. 287-304.
>> >> >
>> >> >
>> >>
>> >>
>> >
>>
>>
>>
>
>
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