Currently we are using this script to find files (line 48) under the scripts 
directory and add them to the coverage report. 

After running the programs under test, the script is run:

$ ./tests/script/cover-missing.pl
load
ingest
17 known covered file(s) found
preprocess
132 uncovered file(s) found and hashed
process
run: 1492558405.0000.10744
saving

Here it found over 100 files without executions, so our tests are not very 
comprehensive...

First question, is the code below the "best" way to do this?

Second question, is this something that could be provided by the Module via API 
or command line? Something like: cover -know fileName . Maybe even support if 
recursively find files if fileName is a directory.

$ cat -n tests/script/cover-missing.pl [source at 
https://sourceforge.net/u/jpyeron/logwatch/ci/master/tree/tests/script/cover-missing.pl]
     1  #!/usr/bin/perl -w
     2
     3  use Data::Dumper;
     4  use File::Find;
     5  use Cwd;
     6
     7  print "load\n";
     8
     9  use Devel::Cover::DB;
    10
    11  my $dbpath="cover_db";
    12  my $db = Devel::Cover::DB->new(db => $dbpath);
    13  my $timeStart=time;
    14  my $runKey="$timeStart.0000.$$";
    15  my %known;
    16
    17  print "ingest\n";
    18
    19  find({ wanted => \&process_coverfile, no_chdir => 1 }, "$dbpath/runs/");
    20  find({ wanted => \&process_coverfile, no_chdir => 1 }, 
"$dbpath/digests");
    21  find({ wanted => \&process_coverfile, no_chdir => 1 }, 
"$dbpath/structure/");
    22
    23  sub process_coverfile
    24  {
    25      if (-f $_)
    26      {
    27          my $x=$db->read($_);
    28          foreach my $run ($x->runs)
    29          {
    30              my $h=$run->{digests};
    31              foreach my $file (keys %$h)
    32              {
    33                  if ( ! exists $known{$file} )
    34                  {
    35                      $known{$file}=$run->{digests}{$file};
    36                  }
    37              }
    38          }
    39      }
    40  }
    41
    42  print scalar keys %known, " known covered file(s) found\n";
    43
    44  print "preprocess\n";
    45
    46  my %toadd;
    47
    48  find({ wanted => \&process_file, no_chdir => 1 }, "scripts");
    49
    50  sub process_file
    51  {
    52      if (-f $_)
    53      {
    54          if ( ! exists $known{$_} )
    55          {
    56              $toadd{$_}=Devel::Cover::DB::Structure->digest($_);
    57          }
    58      }
    59  }
    60
    61  print scalar keys %toadd, " uncovered file(s) found and hashed\n";
    62
    63
    64  print "process\n";
    65
    66  if (scalar keys %toadd == 0)
    67  {
    68      print "no files to process\n";
    69      exit;
    70  }
    71
    72  print "run: $runKey\n";
    73
    74  $db->{runs}{$runKey}{"OS"}=$^O;
    75  
$db->{runs}{$runKey}{"collected"}=["branch","condition","pod","statement","subroutine","time"];
    76  $db->{runs}{$runKey}{"dir"}=Cwd::abs_path();
    77  $db->{runs}{$runKey}{"vec"}={};
    78  $db->{runs}{$runKey}{"start"}=$timeStart;
    79  $db->{runs}{$runKey}{"run"}=$0;
    80  $_=$^V;
    81  s/v//;
    82  $db->{runs}{$runKey}{"perl"}=$_;
    83
    84  my $s=$db->{structure}=Devel::Cover::DB::Structure->new;
    85
    86  foreach my $file (keys %toadd)
    87  {
    88      
$db->{structure}->{f}{$file}{start}{-1}{"__COVER__"}[0]{"branch"}=undef;
    89      
$db->{structure}->{f}{$file}{start}{-1}{"__COVER__"}[0]{"condition"}=undef;
    90      
$db->{structure}->{f}{$file}{start}{-1}{"__COVER__"}[0]{"pod"}=undef;
    91      
$db->{structure}->{f}{$file}{start}{-1}{"__COVER__"}[0]{"subroutine"}=undef;
    92      
$db->{structure}->{f}{$file}{start}{-1}{"__COVER__"}[0]{"time"}=undef;
    93      
$db->{structure}->{f}{$file}{start}{-1}{"__COVER__"}[0]{"statement"}=0;
    94      $db->{structure}->{f}{$file}{file}=$file;
    95      $db->{structure}->{f}{$file}{digest}=$toadd{$file};
    96      $db->{structure}->{f}{$file}{statement}=[1];
    97      $db->{runs}{$runKey}{"count"}{$file}{'statement'}=[0];
    98      $db->{runs}{$runKey}{"digests"}{$file}=$toadd{$file};
    99  }
   100
   101  $db->{runs}{$runKey}{"finish"}=time;
   102
   103  print "saving\n";
   104
   105  $db->write("$dbpath/runs/$runKey");


-Jason

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