我也觉得可疑之处在于 py 的程序。
建议在每个步骤加入debug代码。查看在哪一步执行出错的
在 2013年5月10日星期五UTC+8上午10时45分51秒，Perl360写道：
>
> 下面是我写的程序，本人新手，代码写的乱，还请见谅。遇到的问题是在windows下运行成功，但在linux下却运行没有结果，请帮帮我！
>
> use File::Copy ;
>
> open(INPUT,"taxID.txt");
>
> $i=0;
> while (<INPUT>) {
> chomp($_);
> chomp($_);
> $M[$i] = $_;
> $i++;
> }
> $len=@M;
>
> for ($i=0;$i<$len;$i++) {
>
> open(INPUT1,"417species_PPI.txt");
> open(OUTPUT1,">species_PPI.txt");
>
> my $species = $M[$i];
>
> mkdir($species,0755)||die "can't create directory: $!" ;
>
> print "Now it is ",$species," it is the ",$i," of these
> species,remains
> ",$len-$i," species.\n";
>
> while(<INPUT1>) {
> if ($_=~/^($M[$i])\.(.*)/){
> print OUTPUT1 $_;
> }
> }
> close(INPUT1);
> close(OUTPUT1);
>
> open(INPUT2,"species_PPI.txt");
> open(OUTPUT2,">species_PPI2.txt");
>
> while(<INPUT2>) {
> chomp($_);
> my@a=split/\s/;
> print OUTPUT2 "$a[0]\t$a[1]\n";
> }
> close INPUT2;
> close OUTPUT2;
>
> $system_check=system("python jisuan.py");
>
> open INPUT3,"degree_centrality.txt";
> open INPUT4,"closeness_centrality.txt";
> open INPUT5,"betweenness_centrality.txt";
> open INPUT6,"clustering_coefficient.txt";
> open OUTPUT3,">degreenew_centrality.txt";
> open OUTPUT4,">closenessnew_centrality.txt";
> open OUTPUT5,">betweennessnew_centrality.txt";
> open OUTPUT6,">clusteringnew_coefficient.txt";
>
> while (<INPUT3>) {
> s/{(.*)}/$1/g;
> s/\s//g;
> s/,/\n/g;
> s/'(.*)'\:(\d+)/$1\t$2/g;
> print OUTPUT3 $_,"\n";
> }
> close INPUT3;
> close OUTPUT3;
> while (<INPUT4>) {
> s/{(.*)}/$1/g;
> s/\s//g;
> s/,/\n/g;
> s/'(.*)'\:(\d+)/$2/g;
> print OUTPUT4 $_,"\n";
> }
> close INPUT4;
> close OUTPUT4;
> while (<INPUT5>) {
> s/{(.*)}/$1/g;
> s/\s//g;
> s/,/\n/g;
> s/'(.*)'\:(\d+)/$2/g;
> print OUTPUT5 $_,"\n";
> }
> close INPUT5;
> close OUTPUT5;
> while (<INPUT6>) {
> s/{(.*)}/$1/g;
> s/\s//g;
> s/,/\n/g;
> s/'(.*)'\:(\d+)/$2/g;
> print OUTPUT6 $_,"\n";
> }
> close INPUT6;
> close OUTPUT6;
>
> move("degreenew_centrality.txt","$species")||warn "could not copy
> files
> :$!" ;
> move("closenessnew_centrality.txt","$species")||warn "could not
> copy
> files :$!" ;
> move("betweennessnew_centrality.txt","$species")||warn "could not
> copy
> files :$!" ;
> move("clusteringnew_coefficient.txt","$species")||warn "could not
> copy
> files :$!" ;
>
> }
> close INPUT;
>
> --
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>
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