On Tue, Jul 10, 2012 at 12:04 PM, Matthew Knepley <knepley at gmail.com> wrote:
> On Tue, Jul 10, 2012 at 11:59 AM, Thomas Hisch <t.hisch at gmail.com> wrote: > >> Thx for the hint. >> >> Should PETSc-dev in principle work with gcc-4.7, because I get the >> following error while building petsc: >> > > Jed is fixing that now. C++ compilers are extraordinarily dumb, and cannot > cast > a 'volatile std::complex' to 'std::complex'. Should be ready soon. > http://petsc.cs.iit.edu/petsc/petsc-dev/rev/664ec55a8ab3 > > Matt > > >> ----------------------------------------- >> Using C/C++ compile: mpicxx -c -Wall -Wwrite-strings >> -Wno-strict-aliasing -Wno-unknown-pragmas -O3 -fPIC >> -I/home/thomas/local/src/petsc-dev/include >> -I/home/thomas/local/src/petsc-dev/arch-linux2-cxx-release/include >> -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi >> -D__INSDIR__=./ >> Using Fortran compile: mpif90 -c -fPIC -Wall -Wno-unused-variable >> -Wno-unused-dummy-argument >> -I/home/thomas/local/src/petsc-dev/include >> -I/home/thomas/local/src/petsc-dev/arch-linux2-cxx-release/include >> -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi >> ----------------------------------------- >> Using C/C++ linker: mpicxx >> Using C/C++ flags: -Wall -Wwrite-strings -Wno-strict-aliasing >> -Wno-unknown-pragmas -O3 >> Using Fortran linker: mpif90 >> Using Fortran flags: -fPIC -Wall -Wno-unused-variable >> -Wno-unused-dummy-argument >> ----------------------------------------- >> Using libraries: >> -Wl,-rpath,/home/thomas/local/src/petsc-dev/arch-linux2-cxx-release/lib >> -L/home/thomas/local/src/petsc-dev/arch-linux2-cxx-release/lib >> -lpetsc -lX11 >> -Wl,-rpath,/home/thomas/local/src/petsc-dev/arch-linux2-cxx-release/lib >> -lfftw3_mpi -lfftw3 -lpthread >> -Wl,-rpath,/opt/intel/composer_xe_2011_sp1.11.339/mkl/lib/intel64 >> -L/opt/intel/composer_xe_2011_sp1.11.339/mkl/lib/intel64 -llapack >> -lblas -Wl,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib >> -Wl,-rpath,/usr/lib/gcc/x86_64-linux-gnu/4.7 >> -L/usr/lib/gcc/x86_64-linux-gnu/4.7 >> -Wl,-rpath,/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu >> -Wl,-rpath,/lib/x86_64-linux-gnu -L/lib/x86_64-linux-gnu >> -Wl,-rpath,/opt/intel/composer_xe_2011_sp1.11.339/compiler/lib/intel64 >> -L/opt/intel/composer_xe_2011_sp1.11.339/compiler/lib/intel64 >> -Wl,-rpath,/opt/intel/composer_xe_2011_sp1.10.319/compiler/lib/intel64 >> -L/opt/intel/composer_xe_2011_sp1.10.319/compiler/lib/intel64 >> -Wl,-rpath,/opt/intel/composer_xe_2011_sp1.10.319/ipp/lib/intel64 >> -L/opt/intel/composer_xe_2011_sp1.10.319/ipp/lib/intel64 >> -Wl,-rpath,/opt/intel/composer_xe_2011_sp1.10.319/mkl/lib/intel64 >> -L/opt/intel/composer_xe_2011_sp1.10.319/mkl/lib/intel64 >> >> -Wl,-rpath,/opt/intel/composer_xe_2011_sp1.10.319/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 >> >> -L/opt/intel/composer_xe_2011_sp1.10.319/tbb/lib/intel64/cc4.1.0_libc2.4_kernel2.6.16.21 >> -lmpi_f90 -lmpi_f77 -lgfortran -lm -lgfortran -lm -lgfortran -lm -lm >> -lquadmath -lm -lmpi_cxx -lstdc++ -ldl -lmpi -lopen-rte -lopen-pal >> -lnsl -lutil -lgcc_s -lpthread -ldl >> ------------------------------------------ >> Using mpiexec: mpiexec >> ========================================== >> Building PETSc using CMake with 5 build threads >> ========================================== >> Re-run cmake file: Makefile older than: ../CMakeLists.txt >> -- Configuring done >> -- Generating done >> -- Build files have been written to: >> /home/thomas/local/src/petsc-dev/arch-linux2-cxx-release >> Scanning dependencies of target petsc >> [ 0%] Building Fortran object >> CMakeFiles/petsc.dir/src/sys/f90-mod/petscsysmod.F.o >> [ 0%] Building Fortran object >> CMakeFiles/petsc.dir/src/vec/f90-mod/petscvecmod.F.o >> [ 1%] Building Fortran object >> CMakeFiles/petsc.dir/src/mat/f90-mod/petscmatmod.F.o >> [ 1%] Building Fortran object >> CMakeFiles/petsc.dir/src/dm/f90-mod/petscdmmod.F.o >> [ 1%] Building Fortran object >> CMakeFiles/petsc.dir/src/ksp/f90-mod/petsckspmod.F.o >> [ 1%] Building Fortran object >> CMakeFiles/petsc.dir/src/snes/f90-mod/petscsnesmod.F.o >> [ 2%] [ 2%] [ 2%] [ 2%] [ 2%] Building Fortran object >> CMakeFiles/petsc.dir/src/ts/f90-mod/petsctsmod.F.o >> Building CXX object CMakeFiles/petsc.dir/src/sys/verbose/verboseinfo.c.o >> Building CXX object CMakeFiles/petsc.dir/src/sys/viewer/interface/view.c.o >> Building CXX object >> CMakeFiles/petsc.dir/src/sys/viewer/interface/viewregall.c.o >> Building CXX object >> CMakeFiles/petsc.dir/src/sys/viewer/interface/flush.c.o >> [ 2%] In file included from >> /home/thomas/local/src/petsc-dev/include/petscsys.h:1536:0, >> from >> /home/thomas/local/src/petsc-dev/src/sys/verbose/verboseinfo.c:6: >> /home/thomas/local/src/petsc-dev/include/petsc-private/petscimpl.h: In >> function ?PetscBool PetscCheckPointer(const void*, PetscDataType)?: >> /home/thomas/local/src/petsc-dev/include/petsc-private/petscimpl.h:197:60: >> error: no matching function for call to >> ?std::complex<double>::complex(volatile PetscScalar&)? >> /home/thomas/local/src/petsc-dev/include/petsc-private/petscimpl.h:197:60: >> note: candidates are: >> In file included from >> /home/thomas/local/src/petsc-dev/include/petscmath.h:60:0, >> from >> /home/thomas/local/src/petsc-dev/include/petscsys.h:337, >> from >> /home/thomas/local/src/petsc-dev/src/sys/verbose/verboseinfo.c:6: >> /usr/include/c++/4.7/complex:1205:26: note: >> std::complex<double>::complex(const std::complex<float>&) >> /usr/include/c++/4.7/complex:1205:26: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?const std::complex<float>&? >> /usr/include/c++/4.7/complex:1195:26: note: >> std::complex<double>::complex(double, double) >> /usr/include/c++/4.7/complex:1195:26: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?double? >> /usr/include/c++/4.7/complex:1193:26: note: >> std::complex<double>::complex(std::complex<double>::_ComplexT) >> /usr/include/c++/4.7/complex:1193:26: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?std::complex<double>::_ComplexT {aka >> __complex__ double}? >> /usr/include/c++/4.7/complex:1188:12: note: >> std::complex<double>::complex(const std::complex<double>&) >> /usr/include/c++/4.7/complex:1188:12: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?const std::complex<double>&? >> In file included from >> /home/thomas/local/src/petsc-dev/include/petscsys.h:1536:0, >> from >> /home/thomas/local/src/petsc-dev/include/petsc-private/viewerimpl.h:5, >> from >> /home/thomas/local/src/petsc-dev/src/sys/viewer/interface/flush.c:2: >> /home/thomas/local/src/petsc-dev/include/petsc-private/petscimpl.h: In >> function ?PetscBool PetscCheckPointer(const void*, PetscDataType)?: >> /home/thomas/local/src/petsc-dev/include/petsc-private/petscimpl.h:197:60: >> error: no matching function for call to >> ?std::complex<double>::complex(volatile PetscScalar&)? >> /home/thomas/local/src/petsc-dev/include/petsc-private/petscimpl.h:197:60: >> note: candidates are: >> In file included from >> /home/thomas/local/src/petsc-dev/include/petscmath.h:60:0, >> from >> /home/thomas/local/src/petsc-dev/include/petscsys.h:337, >> from >> /home/thomas/local/src/petsc-dev/include/petsc-private/viewerimpl.h:5, >> from >> /home/thomas/local/src/petsc-dev/src/sys/viewer/interface/flush.c:2: >> /usr/include/c++/4.7/complex:1205:26: note: >> std::complex<double>::complex(const std::complex<float>&) >> /usr/include/c++/4.7/complex:1205:26: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?const std::complex<float>&? >> /usr/include/c++/4.7/complex:1195:26: note: >> std::complex<double>::complex(double, double) >> /usr/include/c++/4.7/complex:1195:26: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?double? >> /usr/include/c++/4.7/complex:1193:26: note: >> std::complex<double>::complex(std::complex<double>::_ComplexT) >> /usr/include/c++/4.7/complex:1193:26: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?std::complex<double>::_ComplexT {aka >> __complex__ double}? >> /usr/include/c++/4.7/complex:1188:12: note: >> std::complex<double>::complex(const std::complex<double>&) >> /usr/include/c++/4.7/complex:1188:12: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?const std::complex<double>&? >> Building CXX object >> CMakeFiles/petsc.dir/src/sys/viewer/interface/viewreg.c.o >> In file included from >> /home/thomas/local/src/petsc-dev/include/petscsys.h:1536:0, >> from >> /home/thomas/local/src/petsc-dev/include/petsc-private/viewerimpl.h:5, >> from >> /home/thomas/local/src/petsc-dev/src/sys/viewer/interface/viewregall.c:2: >> /home/thomas/local/src/petsc-dev/include/petsc-private/petscimpl.h: In >> function ?PetscBool PetscCheckPointer(const void*, PetscDataType)?: >> /home/thomas/local/src/petsc-dev/include/petsc-private/petscimpl.h:197:60: >> error: no matching function for call to >> ?std::complex<double>::complex(volatile PetscScalar&)? >> /home/thomas/local/src/petsc-dev/include/petsc-private/petscimpl.h:197:60: >> note: candidates are: >> In file included from >> /home/thomas/local/src/petsc-dev/include/petscmath.h:60:0, >> from >> /home/thomas/local/src/petsc-dev/include/petscsys.h:337, >> from >> /home/thomas/local/src/petsc-dev/include/petsc-private/viewerimpl.h:5, >> from >> /home/thomas/local/src/petsc-dev/src/sys/viewer/interface/viewregall.c:2: >> /usr/include/c++/4.7/complex:1205:26: note: >> std::complex<double>::complex(const std::complex<float>&) >> /usr/include/c++/4.7/complex:1205:26: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?const std::complex<float>&? >> /usr/include/c++/4.7/complex:1195:26: note: >> std::complex<double>::complex(double, double) >> /usr/include/c++/4.7/complex:1195:26: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?double? >> /usr/include/c++/4.7/complex:1193:26: note: >> std::complex<double>::complex(std::complex<double>::_ComplexT) >> /usr/include/c++/4.7/complex:1193:26: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?std::complex<double>::_ComplexT {aka >> __complex__ double}? >> /usr/include/c++/4.7/complex:1188:12: note: >> std::complex<double>::complex(const std::complex<double>&) >> /usr/include/c++/4.7/complex:1188:12: note: no known conversion for >> argument 1 from ?volatile PetscScalar {aka volatile >> std::complex<double>}? to ?const std::complex<double>&? >> ...... >> >> I called configure with: >> >> ./configure --with-c++-support=1 --with-scalar-type=complex >> --with-x11=0 --with-clanguage=cxx >> >> --with-blas-lapack-dir=/opt/intel/composer_xe_2011_sp1.11.339/mkl/lib/intel64 >> CXXOPTFLAGS="-O3" COPTFLAGS="-O3" FOPTFLAGS="-03" >> --with-shared-libraries=1 --with-debugging=0 --download-fftw=1 >> >> Regards >> Thomas >> >> >> On Tue, Jul 10, 2012 at 6:44 PM, ajay.rawat83 at gmail.com >> <ajay.rawat83 at gmail.com> wrote: >> > No, try to use petsc-dev with slepc-dev >> > -----Original message----- >> > From: Thomas Hisch >> > Sent: 10/07/2012, 9:07 pm >> > To: PETSc users list >> > Subject: Re: [petsc-users] FFT Matrix Examples/Tests: Compiletime error >> > >> > >> > Hey, >> > >> > thx for your quick response! Is petsc-3.3 compatible with the current >> > slepc-3.2 ?? >> > >> > On Tue, Jul 10, 2012 at 5:31 PM, Hong Zhang <hzhang at mcs.anl.gov> wrote: >> >> Thomas: >> >> Please update to petsc-3.3, and build it with FFTW. >> >> ex148.c was rewritten using FFTW. >> >> >> >> Hong >> >> >> >>> Hello list! >> >>> >> >>> I tried to test one of the FFT examples in src/mat/examples/tests/ by >> >>> typing "make ex148" in this directory. Unfortunately the compilation >> >>> failed: >> >>> >> >>> mpicxx -o ex148.o -c -Wall -Wwrite-strings -Wno-strict-aliasing >> >>> -Wno-unknown-pragmas -O3 -fPIC >> >>> -I/home/thomas/local/src/petsc-3.2-p6/include >> >>> -I/home/thomas/local/src/petsc-3.2-p6/arch-linux2-cxx-release/include >> >>> -I/usr/lib/openmpi/include -I/usr/lib/openmpi/include/openmpi >> >>> -D__INSDIR__=src/mat/examples/tests/ ex148.c >> >>> ex148.c: In function ?PetscInt main(PetscInt, char**)?: >> >>> ex148.c:45:37: error: ?InputTransformFFT? was not declared in this >> scope >> >>> ex148.c:54:39: error: ?OutputTransformFFT? was not declared in this >> scope >> >>> make: [ex148.o] Error 1 (ignored) >> >>> >> >>> All the other FFT examples seem to use these two Transformation >> >>> functions as well. Any ideas where these functions are defined ? >> >>> >> >>> Regards, >> >>> Thomas >> >> >> >> >> > >> > > > > -- > What most experimenters take for granted before they begin their > experiments is infinitely more interesting than any results to which their > experiments lead. > -- Norbert Wiener > -------------- next part -------------- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20120710/55b220d4/attachment.html>
