The problem is detected in MatTranspose and Jed was messing with this a few weeks ago ...
On Oct 25, 2012, at 6:48 AM, John Mousel <john.mousel at gmail.com> wrote: > Mark, > > Yes, this worked before pulling. I hadn't pulled on that machine in a few > weeks though. > > John > > On Thu, Oct 25, 2012 at 1:18 AM, Mark F. Adams <mark.adams at columbia.edu> > wrote: > Did this work before the pull? > > Mark > > On Oct 24, 2012, at 8:04 PM, John Mousel <john.mousel at gmail.com> wrote: > > > I just pulled and I'm getting the error below when running with GAMG. > > > > [20]PETSC ERROR: --------------------- Error Message > > ------------------------------------ > > [20]PETSC ERROR: Corrupted Petsc object! > > [20]PETSC ERROR: corrupted ta->count! > > [20]PETSC ERROR: > > ------------------------------------------------------------------------ > > [20]PETSC ERROR: Petsc Development HG revision: > > 2b3cccd7bd8ff536f48616e4402b164ba9cd12d0 HG Date: Wed Oct 24 21:15:30 2012 > > -0500 > > [20]PETSC ERROR: See docs/changes/index.html for recent updates. > > [73]PETSC ERROR: [20]PETSC ERROR: --------------------- Error Message > > ------------------------------------ > > See docs/faq.html for hints about trouble shooting. > > [73]PETSC ERROR: [20]PETSC ERROR: See docs/index.html for manual pages. > > Corrupted Petsc object! > > [20]PETSC ERROR: [73]PETSC ERROR: > > ------------------------------------------------------------------------ > > corrupted ta->count! > > [253]PETSC ERROR: --------------------- Error Message > > ------------------------------------ > > [253]PETSC ERROR: Corrupted Petsc object! > > [253]PETSC ERROR: corrupted ta->count! > > [253]PETSC ERROR: > > ------------------------------------------------------------------------ > > [253]PETSC ERROR: Petsc Development HG revision: > > 2b3cccd7bd8ff536f48616e4402b164ba9cd12d0 HG Date: Wed Oct 24 21:15:30 2012 > > -0500 > > [253]PETSC ERROR: See docs/changes/index.html for recent updates. > > [253]PETSC ERROR: See docs/faq.html for hints about trouble shooting. > > [253]PETSC ERROR: See docs/index.html for manual pages. > > [253]PETSC ERROR: > > ------------------------------------------------------------------------ > > [253]PETSC ERROR: /nfsscratch/Users/jmousel/MHV/MHV_exe on a intel-opt > > named compute-6-165.local by jmousel Wed Oct 24 21:59:50 2012 > > [253]PETSC ERROR: Libraries linked from > > /Users/jmousel/SOFT/petsc-dev/intel-opt/lib > > [253]PETSC ERROR: Configure run at Wed Oct 24 21:41:09 2012 > > [253]PETSC ERROR: Configure options --download-blacs=1 --download-cmake=1 > > --download-hypre=1 --download-metis=1 --download-ml=1 --download-parmetis=1 > > --download-scalapack=1 > > --with-blas-lapack-dir=/opt/intel/mkl/10.2.5.035/lib/em64t > > --with-debugging=0 --with-mpi-dir=/opt/openmpi/1.4.3/intel COPTFLAGS=-O2 > > FOPTFLAGS=-O2 PETSC_ARCH=intel-opt > > [253]PETSC ERROR: > > ------------------------------------------------------------------------ > > [253]PETSC ERROR: PetscTableAddExpand() line 145 in src/sys/utils/ctable.c > > [253]PETSC ERROR: PetscTableAdd() line 75 in > > src/sys/sf//Users/jmousel/SOFT/petsc-dev/include/petscctable.h > > [253]PETSC ERROR: PetscSFSetGraph() line 327 in src/sys/sf/sf.c > > [253]PETSC ERROR: PetscSFSetGraphLayout() line 595 in > > src/vec/vec/impls/mpi/pmap.c > > [253]PETSC ERROR: MatTranspose_MPIAIJ() line 2130 in > > src/mat/impls/aij/mpi/mpiaij.c > > [253]PETSC ERROR: MatTranspose() line 4350 in src/mat/interface/matrix.c > > [253]PETSC ERROR: PCGAMGFilterGraph() line 136 in > > src/ksp/pc/impls/gamg/tools.c > > [253]PETSC ERROR: PCGAMGgraph_AGG() line 979 in src/ksp/pc/impls/gamg/agg.c > > [253]PETSC ERROR: PCSetUp_GAMG() line 685 in src/ksp/pc/impls/gamg/gamg.c > > [253]PETSC ERROR: PCSetUp() line 832 in src/ksp/pc/interface/precon.c > > [253]PETSC ERROR: KSPSetUp() line 278 in src/ksp/ksp/interface/itfunc.c > > [253]PETSC ERROR: KSPSolve() line 402 in src/ksp/ksp/interface/itfunc.c > > [73]PETSC ERROR: [20]PETSC ERROR: > > ------------------------------------------------------------------------ > > /nfsscratch/Users/jmousel/MHV/MHV_exe on a intel-opt named > > compute-1-16.local by jmousel Wed Oct 24 21:59:50 2012 > > [73]PETSC ERROR: [20]PETSC ERROR: Libraries linked from > > /Users/jmousel/SOFT/petsc-dev/intel-opt/lib > > [35]PETSC ERROR: Petsc Development HG revision: > > 2b3cccd7bd8ff536f48616e4402b164ba9cd12d0 HG Date: Wed Oct 24 21:15:30 2012 > > -0500 > > [20]PETSC ERROR: [73]PETSC ERROR: See docs/changes/index.html for recent > > updates. > > Configure run at Wed Oct 24 21:41:09 2012 > > --------------------- Error Message ------------------------------------ > > [73]PETSC ERROR: [20]PETSC ERROR: [35]PETSC ERROR: Configure options > > --download-blacs=1 --download-cmake=1 --download-hypre=1 --download-metis=1 > > --download-ml=1 --download-parmetis=1 --download-scalapack=1 > > --with-blas-lapack-dir=/opt/intel/mkl/10.2.5.035/lib/em64t > > --with-debugging=0 --with-mpi-dir=/opt/openmpi/1.4.3/intel COPTFLAGS=-O2 > > FOPTFLAGS=-O2 PETSC_ARCH=intel-opt > > See docs/faq.html for hints about trouble shooting. > > -------------- next part -------------- An HTML attachment was scrubbed... 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