Thank you, Peter.
On Thu, Dec 13, 2012 at 3:04 PM, Peter Brune <prbrune at gmail.com> wrote: > Dangit Barry! I already started a patch moving all Jed's -snes_compare_* > garbage in SNESComputeJacobian() over to a SNESJacobianMonitor registration > type deal where it has functions you can register to run after computing > the Jacobian. This will allow you to do all sorts of nice comparisons. > > Dangit Jed! -snes_compare_* is a seeerious mess and shouldn't be in > SNESComputeJacobian(). Barry's recent holy war against string comparisons > will find this some day and there will be a lot of explaining to do. > > - Peter > > > > On Thu, Dec 13, 2012 at 4:59 PM, Jed Brown <jedbrown at mcs.anl.gov> wrote: > >> Surely you were aware of the -snes_compare_* options that can be >> activated in SNESComputeJacobian(). >> >> Can we settle on one common way to do this testing and perhaps remove >> -snes_type test. >> >> >> On Thu, Dec 13, 2012 at 2:55 PM, Barry Smith <bsmith at mcs.anl.gov> wrote: >> >>> >>> I got sick of -snes_type test only checking the Jacobian at the >>> initial solution and not being able to test later Jacobians so I added >>> -snes_check_jacobian that allows the regular running of SNESSolve() (also >>> inside TS) and compares every Jacobian computed with a finite difference >>> version. >>> >>> For example, (already found one bug in one example :-(). This may be >>> the best thing I've added to PETSc in a decade. >>> >>> Barry >>> >>> >>> Barrys-MacBook-Pro:advection-diffusion-reaction barrysmith$ ./ex1 >>> -snes_check_jacobian -snes_monitor -ts_type arkimex | more >>> 0 SNES Function norm 2.182384017537e+00 >>> Testing hand-coded Jacobian, if the ratio is O(1.e-8), the >>> hand-coded Jacobian is probably correct. >>> Run with -snes_check_jacobian_display to show difference of >>> hand-coded and finite difference Jacobian. >>> 1.68322e-09 = ||J - Jfd||//J|| 6.69028e-06 = ||J - Jfd|| >>> 1 SNES Function norm 4.695397453383e-07 >>> Testing hand-coded Jacobian, if the ratio is O(1.e-8), the >>> hand-coded Jacobian is probably correct. >>> Run with -snes_check_jacobian_display to show difference of >>> hand-coded and finite difference Jacobian. >>> 2.45109e-09 = ||J - Jfd||//J|| 9.74235e-06 = ||J - Jfd|| >>> 2 SNES Function norm 4.020379099215e-13 >>> 0 SNES Function norm 6.799718390407e-01 >>> Testing hand-coded Jacobian, if the ratio is O(1.e-8), the >>> hand-coded Jacobian is probably correct. >>> Run with -snes_check_jacobian_display to show difference of >>> hand-coded and finite difference Jacobian. >>> 1.65487e-09 = ||J - Jfd||//J|| 6.5776e-06 = ||J - Jfd|| >>> 1 SNES Function norm 4.558192078678e-08 >>> Testing hand-coded Jacobian, if the ratio is O(1.e-8), the >>> hand-coded Jacobian is probably correct. >>> Run with -snes_check_jacobian_display to show difference of >>> hand-coded and finite difference Jacobian. >>> 2.93714e-09 = ||J - Jfd||//J|| 1.16742e-05 = ||J - Jfd|| >>> 2 SNES Function norm 9.907308296870e-14 >>> 0 SNES Function norm 1.000842117652e+00 >>> Testing hand-coded Jacobian, if the ratio is O(1.e-8), the >>> hand-coded Jacobian is probably correct. >>> Run with -snes_check_jacobian_display to show difference of >>> hand-coded and finite difference Jacobian. >>> 1.24476e-09 = ||J - Jfd||//J|| 4.94755e-06 = ||J - Jfd|| >>> 1 SNES Function norm 9.875108391772e-08 >>> Testing hand-coded Jacobian, if the ratio is O(1.e-8), the >>> hand-coded Jacobian is probably correct. >>> Run with -snes_check_jacobian_display to show difference of >>> hand-coded and finite difference Jacobian. >>> 1.10818e-10 = ||J - Jfd||//J|| 4.40468e-07 = ||J - Jfd|| >>> 2 SNES Function norm 7.677760150017e-14 >>> 0 SNES Function norm 2.179048757949e+00 >>> Testing hand-coded Jacobian, if the ratio is O(1.e-8), the >>> hand-coded Jacobian is probably correct. >>> Run with -snes_check_jacobian_display to show difference of >>> hand-coded and finite difference Jacobian. >>> 1.32338e-09 = ||J - Jfd||//J|| 5.27058e-07 = ||J - Jfd|| >>> 1 SNES Function norm 4.625448863612e-05 >>> Testing hand-coded Jacobian, if the ratio is O(1.e-8), the >>> hand-coded Jacobian is probably correct. >>> Run with -snes_check_jacobian_display to show difference of >>> hand-coded and finite difference Jacobian. >>> 1.57582e-09 = ||J - Jfd||//J|| 6.27588e-07 = ||J - Jfd|| >>> 2 SNES Function norm 4.391784647745e-14 >>> 0 SNES Function norm 6.761591873515e-01 >>> Testing hand-coded Jacobian, if the ratio is O(1.e-8), the >>> hand-coded Jacobian is probably correct. >>> >>> >>> >> > -------------- next part -------------- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-dev/attachments/20121213/37b44a0a/attachment-0001.html>
