--with-blas-lapack-lib=-lopenblas --known-64-bit-blas-indices=0
is working.
Thanks.
On 31/08/2018 20:11, Satish Balay wrote:
> It should work. configure.log will have details..
>
> Satish
>
> ----------
>
> balay@asterix /home/balay/petsc (maint=)
> $ ./configure --with-blaslapack-lib=-lopenblas
> ===============================================================================
> Configuring PETSc to compile on your system
>
> ===============================================================================
> ===============================================================================
>
> It appears you do not have valgrind installed on your system.
>
> We HIGHLY recommend you install it from www.valgrind.org
>
> Or install valgrind-devel or equivalent using your
> package manager.
> Then rerun ./configure
>
>
> ===============================================================================
>
> Compilers:
>
>
> C Compiler: mpicc -Wall -Wwrite-strings -Wno-strict-aliasing
> -Wno-unknown-pragmas -fstack-protector -fvisibility=hidden -g3
> C++ Compiler: mpicxx -Wall -Wwrite-strings -Wno-strict-aliasing
> -Wno-unknown-pragmas -fstack-protector -fvisibility=hidden -g
> Fortran Compiler: mpif90 -Wall -ffree-line-length-0
> -Wno-unused-dummy-argument -g
> Linkers:
> Shared linker: mpicc -shared -Wall -Wwrite-strings
> -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector
> -fvisibility=hidden -g3
> Dynamic linker: mpicc -shared -Wall -Wwrite-strings
> -Wno-strict-aliasing -Wno-unknown-pragmas -fstack-protector
> -fvisibility=hidden -g3
> make:
> BLAS/LAPACK: -lopenblas
> MPI:
> cmake:
> X:
> Library: -lX11
> c2html:
> Arch:
> pthread:
> Library: -lpthread
> PETSc:
> PETSC_ARCH: arch-linux2-c-debug
> PETSC_DIR: /home/balay/petsc
> Scalar type: real
> Precision: double
> Clanguage: C
> Integer size: 32
> shared libraries: enabled
> Memory alignment: 16
> xxx=========================================================================xxx
> Configure stage complete. Now build PETSc libraries with (gnumake build):
> make PETSC_DIR=/home/balay/petsc PETSC_ARCH=arch-linux2-c-debug all
> xxx=========================================================================xxx
> balay@asterix /home/balay/petsc (maint=)
>
>
> $
>
>
> On Fri, 31 Aug 2018, Antonio wrote:
>
>> It's failing for missing (not required) links:
>>
>> Executing: mpicc -o /tmp/petsc-FYncGY/config.libraries/conftest
>> -Wl,-z,relro -fPIC -Wall -Wwrite-strings -Wno-strict-aliasing
>> -Wno-unknown-pragmas -fstack-protector -fvisibility=hidden -g3
>> /tmp/petsc-FYncGY/config.libraries/conftest.o -lsunperf -lfui -lfsu
>> -lsunmath -lm -lstdc++ -ldl -L/usr/lib64/openmpi/lib -lmpi_usempif08
>> -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lgfortran -lm
>> -L/usr/lib/gcc/x86_64-redhat-linux/8 -L/usr/lib64/openmpi/lib -lgfortran
>> -lm -lgcc_s -lquadmath -lpthread -lstdc++ -ldl
>> Possible ERROR while running linker: exit code 256
>> stderr:
>> /usr/bin/ld: cannot find -lsunperf
>> /usr/bin/ld: cannot find -lfui
>> /usr/bin/ld: cannot find -lfsu
>> /usr/bin/ld: cannot find -lsunmath
>> collect2: error: ld returned 1 exit status
>> Popping language C
>> Unknown name mangling in BLAS/LAPACK
>> MKL Path not found.. skipping: /cygdrive/c/Program
>> Files/Intel/MKL/9.0
>> MKL Path not found.. skipping: /cygdrive/c/Program
>> Files/Intel/MKL/8.1.1
>> MKL Path not found.. skipping: /cygdrive/c/Program
>> Files/Intel/MKL/8.1
>> MKL Path not found.. skipping: /cygdrive/c/Program
>> Files/Intel/MKL/8.0.1
>> MKL Path not found.. skipping: /cygdrive/c/Program
>> Files/Intel/MKL/8.0
>> MKL Path not found.. skipping: /cygdrive/c/Program
>> Files/Intel/MKL72
>> MKL Path not found.. skipping: /cygdrive/c/Program
>> Files/Intel/MKL70
>> MKL Path not found.. skipping: /cygdrive/c/Program
>> Files/Intel/MKL61
>> MKL Path not found.. skipping: /cygdrive/c/Program
>> Files/Intel/MKL
>> **** Configure header /tmp/petsc-FYncGY/confdefs.h ****
>>
>> On 31/08/2018 19:41, Smith, Barry F. wrote:
>>>
>>> Ah, sorry for the confusion. We do support --download-openblas where
>>> PETSc will download and install and OpenBlas for you but if you have it
>>> already installed then you need to treat it just as a BLASLAPACK library so
>>> use
>>>
>>>
>>>> --with-blaslapack-include=%{_includedir} \
>>>> --with-blaslapack-lib=%{_libdir}/libopenblas.so \
>>>> --known-64-bit-blas-indices=0 \
>>>
>>> If this fails then mail configure.log to [email protected]
>>>
>>> Barry
>>>
>>
>>
--
---
Antonio Trande
Fedora Project
mailto 'sagitter at fedoraproject dot org'
GPG key: 0x5E212EE1D35568BE
GPG key server: https://keys.fedoraproject.org/
