On 11 Mar 2021, at 6:16 AM, Barry Smith <[email protected]
<mailto:[email protected]>> wrote:
Eric,
Sorry about not being more immediate. We still have this in our
active email so you don't need to submit individual issues. We'll try
to get to them as soon as we can.
Indeed, I’m still trying to figure this out.
I realized that some of my configure flags were different than yours,
e.g., no --with-memalign.
I’ve also added SuperLU_DIST to my installation.
Still, I can’t reproduce any issue.
I will continue looking into this, it appears I’m seeing some valgrind
errors, but I don’t know if this is some side effect of OpenMPI not
being valgrind-clean (last time I checked, there was no error with MPICH).
Thank you for your patience,
Pierre
/usr/bin/gmake -f gmakefile test test-fail=1
Using MAKEFLAGS: test-fail=1
TEST
arch-linux2-c-opt-ompi/tests/counts/snes_tutorials-ex12_quad_hpddm_reuse_baij.counts
ok snes_tutorials-ex12_quad_hpddm_reuse_baij
ok diff-snes_tutorials-ex12_quad_hpddm_reuse_baij
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tests-ex33_superlu_dist_2.counts
ok ksp_ksp_tests-ex33_superlu_dist_2
ok diff-ksp_ksp_tests-ex33_superlu_dist_2
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tests-ex49_superlu_dist.counts
ok ksp_ksp_tests-ex49_superlu_dist+nsize-1herm-0_conv-0
ok diff-ksp_ksp_tests-ex49_superlu_dist+nsize-1herm-0_conv-0
ok ksp_ksp_tests-ex49_superlu_dist+nsize-1herm-0_conv-1
ok diff-ksp_ksp_tests-ex49_superlu_dist+nsize-1herm-0_conv-1
ok ksp_ksp_tests-ex49_superlu_dist+nsize-1herm-1_conv-0
ok diff-ksp_ksp_tests-ex49_superlu_dist+nsize-1herm-1_conv-0
ok ksp_ksp_tests-ex49_superlu_dist+nsize-1herm-1_conv-1
ok diff-ksp_ksp_tests-ex49_superlu_dist+nsize-1herm-1_conv-1
ok ksp_ksp_tests-ex49_superlu_dist+nsize-4herm-0_conv-0
ok diff-ksp_ksp_tests-ex49_superlu_dist+nsize-4herm-0_conv-0
ok ksp_ksp_tests-ex49_superlu_dist+nsize-4herm-0_conv-1
ok diff-ksp_ksp_tests-ex49_superlu_dist+nsize-4herm-0_conv-1
ok ksp_ksp_tests-ex49_superlu_dist+nsize-4herm-1_conv-0
ok diff-ksp_ksp_tests-ex49_superlu_dist+nsize-4herm-1_conv-0
ok ksp_ksp_tests-ex49_superlu_dist+nsize-4herm-1_conv-1
ok diff-ksp_ksp_tests-ex49_superlu_dist+nsize-4herm-1_conv-1
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tutorials-ex50_tut_2.counts
ok ksp_ksp_tutorials-ex50_tut_2
ok diff-ksp_ksp_tutorials-ex50_tut_2
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tests-ex33_superlu_dist.counts
ok ksp_ksp_tests-ex33_superlu_dist
ok diff-ksp_ksp_tests-ex33_superlu_dist
TEST
arch-linux2-c-opt-ompi/tests/counts/snes_tutorials-ex56_hypre.counts
ok snes_tutorials-ex56_hypre
ok diff-snes_tutorials-ex56_hypre
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tutorials-ex56_2.counts
ok ksp_ksp_tutorials-ex56_2
ok diff-ksp_ksp_tutorials-ex56_2
TEST
arch-linux2-c-opt-ompi/tests/counts/snes_tutorials-ex17_3d_q3_trig_elas.counts
ok snes_tutorials-ex17_3d_q3_trig_elas
ok diff-snes_tutorials-ex17_3d_q3_trig_elas
TEST
arch-linux2-c-opt-ompi/tests/counts/snes_tutorials-ex12_quad_hpddm_reuse_threshold_baij.counts
ok snes_tutorials-ex12_quad_hpddm_reuse_threshold_baij
ok diff-snes_tutorials-ex12_quad_hpddm_reuse_threshold_baij
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tutorials-ex5_superlu_dist_3.counts
not ok ksp_ksp_tutorials-ex5_superlu_dist_3 # Error code: 1
#srun: error: Unable to create step for job 1426755: More processors
requested than permitted
ok ksp_ksp_tutorials-ex5_superlu_dist_3 # SKIP Command failed so no diff
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tutorials-ex5f_superlu_dist.counts
ok ksp_ksp_tutorials-ex5f_superlu_dist # SKIP Fortran required for
this test
TEST
arch-linux2-c-opt-ompi/tests/counts/snes_tutorials-ex12_tri_parmetis_hpddm_baij.counts
ok snes_tutorials-ex12_tri_parmetis_hpddm_baij
ok diff-snes_tutorials-ex12_tri_parmetis_hpddm_baij
TEST
arch-linux2-c-opt-ompi/tests/counts/snes_tutorials-ex19_tut_3.counts
ok snes_tutorials-ex19_tut_3
ok diff-snes_tutorials-ex19_tut_3
TEST
arch-linux2-c-opt-ompi/tests/counts/snes_tutorials-ex17_3d_q3_trig_vlap.counts
ok snes_tutorials-ex17_3d_q3_trig_vlap
ok diff-snes_tutorials-ex17_3d_q3_trig_vlap
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tutorials-ex5f_superlu_dist_3.counts
ok ksp_ksp_tutorials-ex5f_superlu_dist_3 # SKIP Fortran required for
this test
TEST
arch-linux2-c-opt-ompi/tests/counts/snes_tutorials-ex19_superlu_dist.counts
ok snes_tutorials-ex19_superlu_dist
ok diff-snes_tutorials-ex19_superlu_dist
TEST
arch-linux2-c-opt-ompi/tests/counts/snes_tutorials-ex56_attach_mat_nearnullspace-1_bddc_approx_hypre.counts
ok snes_tutorials-ex56_attach_mat_nearnullspace-1_bddc_approx_hypre
ok diff-snes_tutorials-ex56_attach_mat_nearnullspace-1_bddc_approx_hypre
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tutorials-ex49_hypre_nullspace.counts
ok ksp_ksp_tutorials-ex49_hypre_nullspace
ok diff-ksp_ksp_tutorials-ex49_hypre_nullspace
TEST
arch-linux2-c-opt-ompi/tests/counts/snes_tutorials-ex19_superlu_dist_2.counts
ok snes_tutorials-ex19_superlu_dist_2
ok diff-snes_tutorials-ex19_superlu_dist_2
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tutorials-ex5_superlu_dist_2.counts
not ok ksp_ksp_tutorials-ex5_superlu_dist_2 # Error code: 1
#srun: error: Unable to create step for job 1426755: More processors
requested than permitted
ok ksp_ksp_tutorials-ex5_superlu_dist_2 # SKIP Command failed so no diff
TEST
arch-linux2-c-opt-ompi/tests/counts/snes_tutorials-ex56_attach_mat_nearnullspace-0_bddc_approx_hypre.counts
ok snes_tutorials-ex56_attach_mat_nearnullspace-0_bddc_approx_hypre
ok diff-snes_tutorials-ex56_attach_mat_nearnullspace-0_bddc_approx_hypre
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tutorials-ex64_1.counts
ok ksp_ksp_tutorials-ex64_1
ok diff-ksp_ksp_tutorials-ex64_1
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tutorials-ex5_superlu_dist.counts
not ok ksp_ksp_tutorials-ex5_superlu_dist # Error code: 1
#srun: error: Unable to create step for job 1426755: More processors
requested than permitted
ok ksp_ksp_tutorials-ex5_superlu_dist # SKIP Command failed so no diff
TEST
arch-linux2-c-opt-ompi/tests/counts/ksp_ksp_tutorials-ex5f_superlu_dist_2.counts
ok ksp_ksp_tutorials-ex5f_superlu_dist_2 # SKIP Fortran required for
this test
Barry
On Mar 10, 2021, at 11:03 PM, Eric Chamberland
<[email protected]
<mailto:[email protected]>> wrote:
Barry,
to get a some follow up on --with-openmp=1 failures, shall I open
gitlab issues for:
a) all hypre failures giving DIVERGED_INDEFINITE_PC
b) all superlu_dist failures giving different results with initia
and "Exceeded timeout limit of 60 s"
c) hpddm failures "free(): invalid next size (fast)" and
"Segmentation Violation"
d) all tao's "Exceeded timeout limit of 60 s"
I don't see how I could do all these debugging by myself...
Thanks,
Eric
