Can you reproduce this with a PETSc example? make test
Satish On Wed, 10 Jan 2007, Paul T. Bauman wrote: > Hello, > > Has anyone had any experience using PETSc and gfortran together? My code > compiles, but when I run it, it crashes with the following error (mac Tiger > 10.4.8, power pc, latest build of gfortran, MPICH2, petsc 2.3.2): > > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: Caught signal number 10 BUS: Bus Error, possibly illegal > memory access > [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger > [0]PETSC ERROR: or see > http://www.mcs.anl.gov/petsc/petsc-as/documentation/troubleshooting.html#Signal[0]PETSC > ERROR: or try http://valgrind.org on linux or man libgmalloc on Apple to find > memory corruption errors > [0]PETSC ERROR: likely location of problem given in stack below > [0]PETSC ERROR: --------------------- Stack Frames > ------------------------------------ > [0]PETSC ERROR: Note: The EXACT line numbers in the stack are not available, > [0]PETSC ERROR: INSTEAD the line number of the start of the function > [0]PETSC ERROR: is given. > [0]PETSC ERROR: --------------------- Error Message > ------------------------------------ > [0]PETSC ERROR: Signal received! > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: Petsc Release Version 2.3.2, Patch 8, Tue Jan 2 14:33:59 PST > 2007 HG revision: ebeddcedcc065e32fc252af32cf1d01ed4fc7a80 > [0]PETSC ERROR: See docs/changes/index.html for recent updates. > [0]PETSC ERROR: See docs/faq.html for hints about trouble shooting. > [0]PETSC ERROR: See docs/index.html for manual pages. > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: EXEC/shrink_tao on a Apple_Pow named > dhcp-67-30.ices.utexas.edu by pbauman Wed Jan 10 17:20:03 2007 > [0]PETSC ERROR: Libraries linked from > /Users/pbauman/LIBRARIES/PETSC/petsc-2.3.2-p8/lib/Apple_PowerPC_Tiger_Debug > [0]PETSC ERROR: Configure run at Tue Jan 9 15:42:42 2007 > [0]PETSC ERROR: Configure options --with-shared=0 --with-clanguage=C++ > --with-mpi-dir=/Users/pbauman/LIBRARIES/MPICH/mpich2-1.0.5_Apple_PowerPC_Tiger_gcc_gfortran > --with-blas-lapack-dir=/Users/pbauman/LIBRARIES/PETSC/petsc-2.3.2-p8/externalpackages/fblaslapack/Apple_PowerPC_Tiger_Debug/ > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: User provided function() line 0 in unknown directory unknown > file > [cli_0]: aborting job: > application called MPI_Abort(MPI_COMM_WORLD, 59) - process 0 > rank 0 in job 2 dhcp-67-30.ices.utexas.edu_50482 caused collective abort of > all ranks > exit status of rank 0: return code 59 > make: *** [run_shrink_tao_tr] Error 59 > > This happens at the very beginning of the code (I put a write statement in at > the first line of the program and nothing came out). This code runs > successfully on linux with intel compilers. I'm sure the problem is somehow > with gfortran/my build, I'm just not sure where to begin with this kind of > problem, so I thought I'd see if anyone had a similar experience. > > Thanks, > > Paul > >
