I think you need to tell use that the IS is a permutation: http://www-unix.mcs.anl.gov/petsc/petsc-as/snapshots/petsc-current/docs/manualpages/IS/ISSetPermutation.html
Matt On 10/25/07, Tim Stitt <timothy.stitt at ichec.ie> wrote: > Hi all, > > Following on from some help I got a few days ago with respect to > MatLUFactorSymbolic() usage in Fortran...I think I now have all the > parts in place but keep getting the following runtime error upon execution: > > [0]PETSC ERROR: --------------------- Error Message > ------------------------------------ > [0]PETSC ERROR: Invalid argument! > [0]PETSC ERROR: not a permutation! > ... > [0]PETSC ERROR: > ------------------------------------------------------------------------ > [0]PETSC ERROR: ISInvertPermutation() line 183 in > src/vec/is/interface/index.c > [0]PETSC ERROR: MatLUFactorSymbolic_SeqAIJ() line 276 in > src/mat/impls/aij/seq/aijfact.c > [0]PETSC ERROR: MatLUFactorSymbolic() line 2178 in > src/mat/interface/matrix.c > [localhost.localdomain:24730] MPI_ABORT invoked on rank 0 in > communicator MPI_COMM_WORLD with errorcode 62 > > Here is the portion of the offending code (I think): > > call MatAssemblyBegin(A,MAT_FINAL_ASSEMBLY,error);CHKERRQ(error) > call MatAssemblyEnd(A,MAT_FINAL_ASSEMBLY,error);CHKERRQ(error) > call ISCreateGeneral(PETSC_COMM_WORLD,order,columnIndices, > indexSet,error);CHKERRQ(error) > call MatFactorInfoInitialize(info,error);CHKERRQ(error) > call > MatLUFactorSymbolic(A,indexSet,indexSet,info,factorMat,error);CHKERRQ(error) > > order - number of rows/columns in square matrix A > columnIndices - 1D array containing values 0-->order-1 > > All types are set correctly as far as I can tell. > > Can anyone suggest why the execution falls over during the > MatLUFactorSymbolic() call? > > Thanks again, > > Tim. > > -- > Dr. Timothy Stitt <timothy_dot_stitt_at_ichec.ie> > HPC Application Consultant - ICHEC (www.ichec.ie) > > Dublin Institute for Advanced Studies > 5 Merrion Square - Dublin 2 - Ireland > > +353-1-6621333 (tel) / +353-1-6621477 (fax) > > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener
