On Mon, 25 Jan 2010, (Rebecca) Xuefei YUAN wrote: > Dear Satish, > > I switched to install it manually
What do you mean? Did you get the nightly tarball? > and encounter an error when "make test". Did the build go through fine without errors?? Send over configure.log and make.log to petsc-maint. Satish > Here are error messages: > > Completed building libraries > ========================================= > Now to check if the libraries are working do: make test > ========================================= > rebecca at YuanWork:~/soft/petsc-dev$ make test > Running test examples to verify correct installation > C/C++ example src/snes/examples/tutorials/ex19 run successfully with 1 MPI > process > C/C++ example src/snes/examples/tutorials/ex19 run successfully with 2 MPI > processes > --------------Error detected during compile or link!----------------------- > See http://www.mcs.anl.gov/petsc/petsc-2/documentation/troubleshooting.html > /home/rebecca/soft/petsc-dev/linux-gnu-c-debug/bin/mpif90 -c -Wall > -Wno-unused-variable -g > -I/home/rebecca/soft/petsc-dev/linux-gnu-c-debug/include > -I/home/rebecca/soft/petsc-dev/include > -I/home/rebecca/soft/petsc-dev/linux-gnu-c-debug/include > -I/home/rebecca/soft/petsc-dev/linux-gnu-c-debug/include > -I/home/rebecca/soft/petsc-dev/linux-gnu-c-debug/include -o ex5f.o ex5f.F > /home/rebecca/soft/petsc-dev/linux-gnu-c-debug/bin/mpif90 -Wall > -Wno-unused-variable -g -o ex5f ex5f.o > -Wl,-rpath,/home/rebecca/soft/petsc-dev/linux-gnu-c-debug/lib > -L/home/rebecca/soft/petsc-dev/linux-gnu-c-debug/lib -lpetscsnes -lpetscksp > -lpetscdm -lpetscmat -lpetscvec -lpetsc -lX11 > -Wl,-rpath,/home/rebecca/soft/petsc-dev/linux-gnu-c-debug/lib > -L/home/rebecca/soft/petsc-dev/linux-gnu-c-debug/lib -lflapack -lfblas -lnsl > -lrt -lm -L/home/rebecca/soft/petsc-dev/linux-gnu-c-debug/lib > -L/usr/lib/gcc/i486-linux-gnu/4.2.4 -ldl -lmpich -lopa -lpthread -lrt -lgcc_s > -lmpichf90 -lgfortran -lm -lm -ldl -lmpich -lopa -lpthread -lrt -lgcc_s -ldl > ex5f.o: In function `MAIN__': > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:103: undefined > reference to `snescreate_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:120: undefined > reference to `dacreateglobalvector_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:121: undefined > reference to `vecduplicate_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:131: undefined > reference to `dagetcorners_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:133: undefined > reference to `dagetghostcorners_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:211: undefined > reference to `snessetfromoptions_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:223: undefined > reference to `snesgetiterationnumber_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:235: undefined > reference to `matdestroy_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:236: undefined > reference to `matdestroy_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:237: undefined > reference to `vecdestroy_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:238: undefined > reference to `vecdestroy_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:239: undefined > reference to `snesdestroy_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:240: undefined > reference to `dadestroy_' > ex5f.o: In function `forminitialguess_': > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:286: undefined > reference to `dmgetlocalvector_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:299: undefined > reference to `dalocaltoglobal_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:300: undefined > reference to `dmrestorelocalvector_' > ex5f.o: In function `formjacobianlocal_': > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:523: undefined > reference to `matsetvalueslocal_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:538: undefined > reference to `matsetvalueslocal_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:542: undefined > reference to `matassemblybegin_' > /home/rebecca/soft/petsc-dev/src/snes/examples/tutorials/ex5f.F:543: undefined > reference to `matassemblyend_' > collect2: ld returned 1 exit status > make[3]: [ex5f] Error 1 (ignored) > /bin/rm -f ex5f.o > Completed test examples > > What could possibly wrong? > > Thanks! > > Rebecca > > > > > Quoting Satish Balay <balay at mcs.anl.gov>: > > > Sorry - forgot to mention the url > > > > http://mail.openjdk.java.net/pipermail/build-dev/2007-December/000628.html > > > > Satish > > > > On Mon, 25 Jan 2010, Satish Balay wrote: > > > > > Do you have to use proxy for your http connections? If so - perhaps > > > you can try adding the settings to ~/.hgrc - as this url indicates and > > > see if it fixes the problem. > > > > > > Satish > > > > > > On Mon, 25 Jan 2010, (Rebecca) Xuefei YUAN wrote: > > > > > > > Hi,All, > > > > > > > > I try to install a pets-dev locally according to the instruction > > > > > > > > http://www.mcs.anl.gov/petsc/petsc-as/developers/index.html > > > > > > > > I have installed mercurial, but when I get the second step, I get some > > > > error > > > > like: > > > > > > > > rebecca at YuanWork:~/soft$ hg clone > > > > http://petsc.cs.iit.edu/petsc/petsc-dev > > > > destination directory: petsc-dev > > > > abort: error: Name or service not known > > > > > > > > Is there anything wrong? > > > > > > > > Thanks! > > > > > > > > > > > > > > > > > > > > > > > >
