On Mon, Sep 27, 2010 at 18:24, Barry Smith <bsmith at mcs.anl.gov> wrote:
>
> ?We need an efficient MatAXPY() that works well for any combination of 
> nonzero patterns. This is not terribly difficult to write. ?Basically for 
> each row create a linked list of the nonzeros in it from the first matrix and 
> then merge in the nonzeros from the second matrix for that row, much like in 
> the LU symbolic factorizations. This will give you row counts, then 
> preallocate the correct nonzero matrix and do the MatSetValues() for the 
> first matrix first row then the second matrix first row etc. Finally swap in 
> the new matrix body into the current matrix.

I don't see why you'd need a linked list for this, you have two sorted
arrays (one for each row) and just need to count the number of unique
elements.  It's one loop.

Jed

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