Here is the answer: http://comments.gmane.org/gmane.comp.clustering.open-mpi.user/12804
On Mon, Aug 6, 2012 at 4:37 PM, Sanjay Govindjee <s_g at berkeley.edu> wrote: > Did you remember to 'source iccvars.sh' first? > > > On 8/6/12 7:18 AM, Adam Stanier wrote: > > > Hello, > > I'm trying to configure PETSc 3.2-p7 with intel composer xe 2011 mpi > libraries. This is the configure line I have been using: > > ./configure --with-cc=mpiicc --with-cxx=mpiicpc --with-fc=mpiifort > --with-blas-lapack-dir=/usr/local/intel/composer_xe_2011_sp1.6.233/mkl/lib/intel64/ > --with-blacs-lib=/usr/local/intel/composer_xe_2011_sp1.6.233/mkl/lib/intel64/libmkl_blacs_intelmpi_lp64.a > --with-blacs-include=/usr/local/intel/composer_xe_2011_sp1.6.233/mkl/include > --with-scalapack-lib=/usr/local/intel/composer_xe_2011_sp1.6.233/mkl/lib/intel64/libmkl_scalapack_lp64.a > --with-scalapack-include=/usr/local/intel/composer_xe_2011_sp1.6.233/mkl/include > --download-parmetis --download-mumps --download-superlu_dist > --download-hypre > --with-mpi-dir=/usr/local/intel/impi/4.0.3.008/intel64/--with-debugging=0 > > This is fine for making PETSc, but when I try to run a code based on the > PETSc libraries I get the following error: > ./sel: symbol lookup error: ./sel: undefined symbol: __intel_sse2_strchr > > I don't get this error when I set --with-debugging=1 with everything else > the same. > > Apparently this symbol should be within the libirc.a library. I notice > that PETSc is looking in a folder for gcc for this library: > -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 > > but I want to use the version within the intel lib directory: > /usr/local/intel/composer_xe_2011_sp1.6.233/compiler/lib/intel64 > > Is there a way to do this? I couldn't find anything by searching. > > Many Thanks, > Adam > > > > -- > ----------------------------------------------- > Sanjay Govindjee, PhD, PE > Professor of Civil Engineering > Vice Chair for Academic Affairs > > 779 Davis Hall > Structural Engineering, Mechanics and Materials > Department of Civil Engineering > University of California > Berkeley, CA 94720-1710 > > Voice: +1 510 642 6060 > FAX: +1 510 643 5264s_g at berkeley.eduhttp://www.ce.berkeley.edu/~sanjay > ----------------------------------------------- > > -- Zhengyong Ren AUG Group, Institute of Geophysics Department of Geosciences, ETH Zurich NO H 47 Sonneggstrasse 5 CH-8092, Z?rich, Switzerland Tel: +41 44 633 37561 e-mail: zhengyong.ren at aug.ig.erdw.ethz.ch Gmail: renzhengyong at gmail.com -------------- next part -------------- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-users/attachments/20120806/c57efbdd/attachment.html>
