OK I see. I will try the download option. Thanks !
On Fri, Apr 26, 2013 at 12:29 AM, Satish Balay <balay at mcs.anl.gov> wrote: > >>>>>>>. > /opt/apps/gotoblas/1.30/libgoto_lp64.so: undefined reference to > `_intel_fast_memcpy' > /opt/apps/gotoblas/1.30/libgoto_lp64.so: undefined reference to > `for_cpystr' > /opt/apps/gotoblas/1.30/libgoto_lp64.so: undefined reference to > `for_concat' > /opt/apps/gotoblas/1.30/libgoto_lp64.so: undefined reference to `__powr8i4' > /opt/apps/gotoblas/1.30/libgoto_lp64.so: undefined reference to > `__svml_cosf4' > /opt/apps/gotoblas/1.30/libgoto_lp64.so: undefined reference to > `__svml_roundf4' > /opt/apps/gotoblas/1.30/libgoto_lp64.so: undefined reference to > `__svml_cos2' > /opt/apps/gotoblas/1.30/libgoto_lp64.so: undefined reference to > `_intel_fast_memset' > /opt/apps/gotoblas/1.30/libgoto_lp64.so: undefined reference to `__powr4i4' > /opt/apps/gotoblas/1.30/libgoto_lp64.so: undefined reference to > `__libm_sse2_sincos' > /opt/apps/gotoblas/1.30/libgoto_lp64.so: undefined reference to > `__svml_logf4' > <<<<<<<<<< > > Looks like this goto blas is built with intel compilers - so it won't > work with gnu compilers. > > [unless you know the intel compiler libraries that are required - and > link them in aswell] > > Or use --download-f-blas-lapack instead. > > Satish > > On Fri, 26 Apr 2013, Kainan Wang wrote: > > > I just tried with the --with-blas-lapack-lib option and it is the same: > it > > works for intel compilers but not for gcc. When having the intel > compiler, > > the configure summary has the following line: > > > > BLAS/LAPACK: -Wl,-rpath,/opt/apps/gotoblas/1.30 -L/opt/apps/gotoblas/1.30 > > -lgoto_lp64 > > > > while configuring with gcc compiler it gives error. > > > > Please see attachment for the configure.log when using gcc to configure. > > > > Kainan > > > > > > On Thu, Apr 25, 2013 at 11:17 PM, Satish Balay <balay at mcs.anl.gov> > wrote: > > > > > On Thu, 25 Apr 2013, Kainan Wang wrote: > > > > > > > Hello, > > > > > > > > I tried to install petsc 3.3-p6 on a cluster with gcc/4.4.3 or > > > > gcc/4.4.5.I manually load the module of gotoblas (v1.30) and specify > > > > in the petsc > > > > configure command as > > > > > > > > ./configure --with-blas-lapack-dir=/opt/apps/gotoblas/1.30 > > > > > > > > and I got the following error: > > > > > > > > ------------------------------------------------------------------------------- > > > > You set a value for --with-blas-lapack-dir=<dir>, but > > > > /opt/apps/gotoblas/1.30 cannot be used > > > > > > > > ******************************************************************************* > > > > > > configure doesn't know enought about goto blas. Try using > > > --with-blas-lapack-lib option and specify the exact link command that > > > should be useable with gotoblas. > > > > > > > > > > > However, if I change the compiler to intel (v11.1) the same > configure can > > > > work and installation is smooth. > > > > > > perhaps configure found a different blas. you can check the summary it > > > printed. > > > > > > If you still have trouble - send configure.log. Without that - we won't > > > know what issues you are encountering. > > > > > > Satish > > > > > > > > > > > > > -- Kainan Wang www.math.tamu.edu/~kwang Texas A&M University --------------- Wish U happiness EveRyday ??? -------------- next part -------------- An HTML attachment was scrubbed... URL: <http://lists.mcs.anl.gov/pipermail/petsc-users/attachments/20130426/94dd4a66/attachment.html>
