Dear PETSc-Team,

I am trying to solve a Poisson equation with a mixed periodic-Dirichlet 
boundary condition. What I have in mind is e.g. a compressible flow with a 
total pressure difference imposed between the two sides of the system, but 
otherwise periodic, and periodic boundary conditions along the remaining two 
dimensions. Another example would be an electrostatic system with dielectric 
contrast in an external electric field / potential difference.

For clarity, if x = 0  (N+1) is the left (right) halo site at the boundary and 
x = 1 (N) is the leftmost (rightmost) site in the physical domain: 

psi(x = 0)  =  psi(x = N) - dpsi
psi(x = N+1) = psi(1) + dpsi

I know it is possible to solve this with a double Poisson solve, which I try to 
avoid for performance reasons.

It is also possible to solve this by modifying the matrix with a master-slave 
approach that imposes the constraint. This requires defining a transformation 
matrix that acts on the matrix, the solution vector and the righthand side of 
the problem.

The core of the problem I have is that the pressure or potential difference 
should not be between the leftmost and rightmost site in the physical domain (a 
standard Dirichlet BC), but between the left- or rightmost site in the physical 
domain and the corresponding halo site at the opposite side of the system. It 
should be possible to do this if the entries of the transformation matrix that 
act on the halo sites can be accessed and modified. 

Is anything like this possible in PETSc?

Best regards and many thanks,
Oliver

--
Dr Oliver Henrich
Edinburgh Parallel Computing Centre
School of Physics and Astronomy
University of Edinburgh
King's Buildings, JCMB
Edinburgh EH9 3FD
United Kingdom

Tel: +44 (0)131 650 5818
Fax: +44 (0)131 650 6555

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The University of Edinburgh is a charitable body, registered in
Scotland, with registration number SC005336



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