On Mon, Jul 11, 2016 at 3:13 AM, Marco Zocca <[email protected]> wrote:
> Sorry for the previous mail, I hadn't fully read ./configure --help : > all external package options are listed there, including HDF5 > > As far as I can see in > https://www.mcs.anl.gov/petsc/miscellaneous/external.html and on the > PDF manual, not all external packages are mentioned, and this tripped > me initially. > > So my question becomes: please synchronize the output of ./configure > --help with manpages and pdf manual :) > Done. https://bitbucket.org/petsc/petsc/commits/b6541ed63645a657daaf31a0efc9fb29a825bfaf Matt > Thanks again, > Marco > > > On 11 July 2016 at 09:57, Marco Zocca <[email protected]> wrote: > > Good morning, > > > > Does the HDF5 functionality need to be explicitly requested at > > configure time? I just noticed that my default configuration on a > > single-node machine does not compile any relevant symbol. > > > > I do not have HDF5 installed on my system yet, but I assumed PETSc > > includes it by default, or automagically pulls the dependency in at > > config time, since the manual doesn't mention anything about it. Do I > > have to install HDF5 from source and rebuild PETSc then? > > > > Thanks in advance, > > Marco > > > > > > > > --- config options and architecture : > > > > Configure Options: --configModules=PETSc.Configure > > --optionsModule=config.compilerOptions --with-cc=gcc --with-cxx=g++ > > --with-fc=gfortran --download-fblaslapack --download-mpich > > Working directory: /Users/ocramz/petsc-3.7.2 > > Machine platform: > > ('Darwin', 'fermi.local', '13.4.0', 'Darwin Kernel Version 13.4.0: Sun > > Aug 17 19:50:11 PDT 2014; root:xnu-2422.115.4~1/RELEASE_X86_64', > > 'x86_64', 'i386') > > Python version: > > 2.7.5 (default, Mar 9 2014, 22:15:05) > > [GCC 4.2.1 Compatible Apple LLVM 5.0 (clang-500.0.68)] > -- What most experimenters take for granted before they begin their experiments is infinitely more interesting than any results to which their experiments lead. -- Norbert Wiener
