I agree, this is an extra hard problem when you add PML to it. Here is a link to a paper that presents a few tricks applied to some aspects of this problem.

Koyama, T. and Govindjee, S., ``Solving generalized complex-symmetriceigenvalue problems arising fromresonant MEMS simulations with PETSc," in Proceedings in AppliedMathematics and Mechanics, 1141701-1141702 (2008) <http://dx.doi.org/10.1002/pamm.200700206>.

http://dx.doi.org/10.1002/pamm.200700206

-sg

On 7/15/16 1:46 AM, Mark Adams wrote:


On Thu, Jul 14, 2016 at 9:10 PM, Barry Smith <[email protected] <mailto:[email protected]>> wrote:


       This is a very difficult problem. I am not surprised that GAMG
    performs poorly, I would be surprised if it performed well at all.

       I think you need to do some googling of   "helmholtz PML linear
    system solve" to find what other people have used. The first hit I
    got was this
    http://www.math.tau.ac.il/services/phd/dissertations/Singer_Ido.pdf
    and every iterative method he tried ended up requiring MANY
    iterations with refinement. This is 14 years old so there will be
    better suggestions out there. One that caught my eye was
    http://www.sciencedirect.com/science/article/pii/S0022247X11005063


      Barry

    Just looking at the matrix makes it clear to me that conventional
    iterative methods are not going to work well, many of the diagonal
    entries are zero and even in rows with a diagonal entry it is much
    smaller in magnitude than the diagonal entries.


Indefinite Helmholtz is hard unless you are not shifting very far. This zero diagonals must come from PML.

First get rid of PML and see if you can solve anything to your satisfaction.

I have a paper on this, using AMG, and I tried to be inclusive, but I did miss a potentially useful method of adding a complex shift to damp the system. You can Google something like 'complex shift helmholtz damp'. If you are shifting deep (high frequency Helmholtz), then use direct solvers.


    > On Jul 13, 2016, at 2:30 PM, Safin, Artur
    <[email protected] <mailto:[email protected]>> wrote:
    >
    > Dear PETSc community,
    >
    > I am working on solving a Helmholtz problem with PML. The issue
    is that I am finding it very hard to deal with the resulting
    matrix system; I can get the correct solution for coarse meshes,
    but it takes roughly 2-4 times as long to converge for each
    successively refined mesh. I've noticed that without PML, I do not
    have problems with convergence speed.
    >
    > I am using the GMRES solver with GAMG as the preconditioner
    (with block-Jacobi preconditioner for the multigrid solves). I
    have also tried to assemble a separate preconditioning matrix with
    the complex shift 1+0.5i, that does not seem to improve the
    results. Currently I am running with
    >
    >    -ksp_type fgmres \
    >    -pc_type gamg \
    >    -mg_levels_pc_type bjacobi \
    >    -pc_mg_type full \
    >    -ksp_gmres_restart 150 \
    >
    > Can anyone suggest some way of speeding up the convergence? Any
    help would be appreciated. I am attaching the output from kspview.
    >
    > Best,
    >
    > Artur
    >
    > <kspview>



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