Hi,
I just tried .F90. It had the error. I attached the full error log.
Thank you.
Frank
On 10/5/2016 6:57 PM, Barry Smith wrote:
PETSc fortran programs should always end with .F90 not .f90 can you try
again with that name? The capital F is important.
Barry
On Oct 5, 2016, at 7:57 PM, frank <[email protected]> wrote:
Hi,
I update petsc to the latest version by pulling from the repo. Then I find one
of my old code, which worked before, output errors now.
After debugging, I find that the error is caused by "DMCreateGlobalVector".
I attach a short program which can re-produce the error. This program works
well with an older version of petsc.
I also attach the script I used to configure petsc.
The error message is below. Did I miss something in the installation ? Thank
you.
1 [0]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
2 [0]PETSC ERROR: Null argument, when expecting valid pointer
3 [0]PETSC ERROR: Null Object: Parameter # 2
4 [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
5 [0]PETSC ERROR: Petsc Development GIT revision: v3.7.4-1571-g7fc5cb5 GIT
Date: 2016-10-05 10:56:19 -0500
6 [0]PETSC ERROR: [2]PETSC ERROR: ./test_ksp.exe on a gnu-dbg-32idx named
kolmog1 by frank Wed Oct 5 17:40:07 2016
7 [0]PETSC ERROR: Configure options --known-mpi-shared="0 " --known-memcmp-ok --with-debugging="1 " --with-shared-libraries=0
--with-mpi-compilers="1 " --download-blacs="1 " --download-metis="1 " --dow nload-parmetis="1 "
--download-superlu_dist="1 " --download-hypre=1 PETSC_ARCH=gnu-dbg-32idx
8 [0]PETSC ERROR: #1 VecSetLocalToGlobalMapping() line 83 in
/home/frank/petsc/src/vec/vec/interface/vector.c
9 [0]PETSC ERROR: #2 DMCreateGlobalVector_DA() line 45 in
/home/frank/petsc/src/dm/impls/da/dadist.c
10 [0]PETSC ERROR: #3 DMCreateGlobalVector() line 880 in
/home/frank/petsc/src/dm/interface/dm.c
Regards,
Frank
<test_vec.f90><gnu-dbg-32idx.py>
[0]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[0]PETSC ERROR: Null argument, when expecting valid pointer
[0]PETSC ERROR: Null Object: Parameter # 2
[0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
[0]PETSC ERROR: Petsc Development GIT revision: v3.7.4-1571-g7fc5cb5 GIT Date:
2016-10-05 10:56:19 -0500
[0]PETSC ERROR: [2]PETSC ERROR: ./test_ksp.exe on a gnu-dbg-32idx named kolmog1
by frank Wed Oct 5 18:58:44 2016
[0]PETSC ERROR: Configure options --known-mpi-shared="0 " --known-memcmp-ok
--with-debugging="1 " --with-shared-libraries=0 --with-mpi-compilers="1 "
--download-blacs="1 " --download-metis="1 " --download-parmetis="1 "
--download-superlu_dist="1 " --download-hypre=1 PETSC_ARCH=gnu-dbg-32idx
[0]PETSC ERROR: #1 VecSetLocalToGlobalMapping() line 83 in
/home/frank/petsc/src/vec/vec/interface/vector.c
--------------------- Error Message
--------------------------------------------------------------
[2]PETSC ERROR: Null argument, when expecting valid pointer
[2]PETSC ERROR: Null Object: Parameter # 2
[2]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
[2]PETSC ERROR: Petsc Development GIT revision: v3.7.4-1571-g7fc5cb5 GIT Date:
2016-10-05 10:56:19 -0500
[2]PETSC ERROR: ./test_ksp.exe on a gnu-dbg-32idx named kolmog1 by frank Wed
Oct 5 18:58:44 2016
[2]PETSC ERROR: Configure options --known-mpi-shared="0 " --known-memcmp-ok
--with-debugging="1 " --with-shared-libraries=0 --with-mpi-compilers="1 "
--download-blacs="1 " --download-metis="1 " --download-parmetis="1 "
--download-superlu_dist="1 " --download-hypre=1 PETSC_ARCH=gnu-dbg-32idx
[2]PETSC ERROR: #1 VecSetLocalToGlobalMapping() line 83 in
/home/frank/petsc/src/vec/vec/interface/vector.c
[2]PETSC ERROR: [0]PETSC ERROR: #2 DMCreateGlobalVector_DA() line 45 in
/home/frank/petsc/src/dm/impls/da/dadist.c
[2]PETSC ERROR: #3 DMCreateGlobalVector() line 880 in
/home/frank/petsc/src/dm/interface/dm.c
#2 DMCreateGlobalVector_DA() line 45 in
/home/frank/petsc/src/dm/impls/da/dadist.c
[0]PETSC ERROR: #3 DMCreateGlobalVector() line 880 in
/home/frank/petsc/src/dm/interface/dm.c
[3]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[3]PETSC ERROR: Null argument, when expecting valid pointer
[3]PETSC ERROR: Null Object: Parameter # 2
[3]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
[3]PETSC ERROR: Petsc Development GIT revision: v3.7.4-1571-g7fc5cb5 GIT Date:
2016-10-05 10:56:19 -0500
[3]PETSC ERROR: ./test_ksp.exe on a gnu-dbg-32idx named kolmog1 by frank Wed
Oct 5 18:58:44 2016
[3]PETSC ERROR: Configure options --known-mpi-shared="0 " --known-memcmp-ok
--with-debugging="1 " --with-shared-libraries=0 --with-mpi-compilers="1 "
--download-blacs="1 " --download-metis="1 " --download-parmetis="1 "
--download-superlu_dist="1 " --download-hypre=1 PETSC_ARCH=gnu-dbg-32idx
[3]PETSC ERROR: #1 VecSetLocalToGlobalMapping() line 83 in
/home/frank/petsc/src/vec/vec/interface/vector.c
[3]PETSC ERROR: #2 DMCreateGlobalVector_DA() line 45 in
/home/frank/petsc/src/dm/impls/da/dadist.c
[3]PETSC ERROR: #3 DMCreateGlobalVector() line 880 in
/home/frank/petsc/src/dm/interface/dm.c
[4]PETSC ERROR: [6]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[6]PETSC ERROR: Null argument, when expecting valid pointer
[6]PETSC ERROR: Null Object: Parameter # 2
[6]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
--------------------- Error Message
--------------------------------------------------------------
[4]PETSC ERROR: Null argument, when expecting valid pointer
[4]PETSC ERROR: Null Object: Parameter # 2
[4]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
[4]PETSC ERROR: Petsc Development GIT revision: v3.7.4-1571-g7fc5cb5 GIT Date:
2016-10-05 10:56:19 -0500
[4]PETSC ERROR: ./test_ksp.exe on a gnu-dbg-32idx named kolmog1 by frank Wed
Oct 5 18:58:44 2016
[4]PETSC ERROR: Configure options --known-mpi-shared="0 " --known-memcmp-ok
--with-debugging="1 " --with-shared-libraries=0 --with-mpi-compilers="1 "
--download-blacs="1 " --download-metis="1 " --download-parmetis="1 "
--download-superlu_dist="1 " --download-hypre=1 PETSC_ARCH=gnu-dbg-32idx
[4]PETSC ERROR: #1 VecSetLocalToGlobalMapping() line 83 in
/home/frank/petsc/src/vec/vec/interface/vector.c
[4]PETSC ERROR: #2 DMCreateGlobalVector_DA() line 45 in
/home/frank/petsc/src/dm/impls/da/dadist.c
[4]PETSC ERROR: #3 DMCreateGlobalVector() line 880 in
/home/frank/petsc/src/dm/interface/dm.c
[6]PETSC ERROR: Petsc Development GIT revision: v3.7.4-1571-g7fc5cb5 GIT Date:
2016-10-05 10:56:19 -0500
[6]PETSC ERROR: ./test_ksp.exe on a gnu-dbg-32idx named kolmog1 by frank Wed
Oct 5 18:58:44 2016
[6]PETSC ERROR: Configure options --known-mpi-shared="0 " --known-memcmp-ok
--with-debugging="1 " --with-shared-libraries=0 --with-mpi-compilers="1 "
--download-blacs="1 " --download-metis="1 " --download-parmetis="1 "
--download-superlu_dist="1 " --download-hypre=1 PETSC_ARCH=gnu-dbg-32idx
[6]PETSC ERROR: #1 VecSetLocalToGlobalMapping() line 83 in
/home/frank/petsc/src/vec/vec/interface/vector.c
[6]PETSC ERROR: #2 DMCreateGlobalVector_DA() line 45 in
/home/frank/petsc/src/dm/impls/da/dadist.c
[6]PETSC ERROR: #3 DMCreateGlobalVector() line 880 in
/home/frank/petsc/src/dm/interface/dm.c
[5]PETSC ERROR: [1]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[1]PETSC ERROR: Null argument, when expecting valid pointer
[1]PETSC ERROR: Null Object: Parameter # 2
[1]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
[1]PETSC ERROR: Petsc Development GIT revision: v3.7.4-1571-g7fc5cb5 GIT Date:
2016-10-05 10:56:19 -0500
[1]PETSC ERROR: ./test_ksp.exe on a gnu-dbg-32idx named kolmog1 by frank Wed
Oct 5 18:58:44 2016
[1]PETSC ERROR: Configure options --known-mpi-shared="0 " --known-memcmp-ok
--with-debugging="1 " --with-shared-libraries=0 --with-mpi-compilers="1 "
--download-blacs="1 " --download-metis="1 " --download-parmetis="1 "
--download-superlu_dist="1 " --download-hypre=1 PETSC_ARCH=gnu-dbg-32idx
[1]PETSC ERROR: #1 VecSetLocalToGlobalMapping() line 83 in
/home/frank/petsc/src/vec/vec/interface/vector.c
[1]PETSC ERROR: #2 DMCreateGlobalVector_DA() line 45 in
/home/frank/petsc/src/dm/impls/da/dadist.c
[1]PETSC ERROR: #3 DMCreateGlobalVector() line 880 in
/home/frank/petsc/src/dm/interface/dm.c
--------------------- Error Message
--------------------------------------------------------------
[5]PETSC ERROR: Null argument, when expecting valid pointer
[5]PETSC ERROR: Null Object: Parameter # 2
[5]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
[5]PETSC ERROR: Petsc Development GIT revision: v3.7.4-1571-g7fc5cb5 GIT Date:
2016-10-05 10:56:19 -0500
[5]PETSC ERROR: ./test_ksp.exe on a gnu-dbg-32idx named kolmog1 by frank Wed
Oct 5 18:58:44 2016
[5]PETSC ERROR: Configure options --known-mpi-shared="0 " --known-memcmp-ok
--with-debugging="1 " --with-shared-libraries=0 --with-mpi-compilers="1 "
--download-blacs="1 " --download-metis="1 " --download-parmetis="1 "
--download-superlu_dist="1 " --download-hypre=1 PETSC_ARCH=gnu-dbg-32idx
[5]PETSC ERROR: #1 VecSetLocalToGlobalMapping() line 83 in
/home/frank/petsc/src/vec/vec/interface/vector.c
[5]PETSC ERROR: #2 DMCreateGlobalVector_DA() line 45 in
/home/frank/petsc/src/dm/impls/da/dadist.c
[5]PETSC ERROR: #3 DMCreateGlobalVector() line 880 in
/home/frank/petsc/src/dm/interface/dm.c
[7]PETSC ERROR: --------------------- Error Message
--------------------------------------------------------------
[7]PETSC ERROR: Null argument, when expecting valid pointer
[7]PETSC ERROR: Null Object: Parameter # 2
[7]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for
trouble shooting.
[7]PETSC ERROR: Petsc Development GIT revision: v3.7.4-1571-g7fc5cb5 GIT Date:
2016-10-05 10:56:19 -0500
[7]PETSC ERROR: ./test_ksp.exe on a gnu-dbg-32idx named kolmog1 by frank Wed
Oct 5 18:58:44 2016
[7]PETSC ERROR: Configure options --known-mpi-shared="0 " --known-memcmp-ok
--with-debugging="1 " --with-shared-libraries=0 --with-mpi-compilers="1 "
--download-blacs="1 " --download-metis="1 " --download-parmetis="1 "
--download-superlu_dist="1 " --download-hypre=1 PETSC_ARCH=gnu-dbg-32idx
[7]PETSC ERROR: #1 VecSetLocalToGlobalMapping() line 83 in
/home/frank/petsc/src/vec/vec/interface/vector.c
[7]PETSC ERROR: #2 DMCreateGlobalVector_DA() line 45 in
/home/frank/petsc/src/dm/impls/da/dadist.c
[7]PETSC ERROR: #3 DMCreateGlobalVector() line 880 in
/home/frank/petsc/src/dm/interface/dm.c
