I don't think you comment is related to this problem. Command Line Tools were also updated. The "right order" is quite simple with Spack, obviously I had whole lot of things re-compiled, including GCC, OpenMPI as well as third party packages used in Petsc.
Regards, Denis > 2 апр. 2017 г., в 13:43, Unal <[email protected]> написал(а): > > In my experience, each time you update Xcode, you also have to update the > Command Line Tools > (https://developer.apple.com/downloads/index.action?=command%20line%20tools), > and reinstall everything again in the right order; in my case, I have to > reinstall Fortran, MPI, HDF5 and PETSc. When one doesn't do it in the right > order, it appears problems like what you reported. > > Santiago > >> On 29 Mar 2017, at 07:26, Denis Davydov <[email protected]> wrote: >> >> Thanks Barry, I can confirm that an adaptation of your patch to 3.7.5 allows >> to compile PETSc. >> >> Regads, >> Denis. >> >> >>> On 29 Mar 2017, at 06:23, Barry Smith <[email protected]> wrote: >>> >>> >>> I have added the commit >>> https://bitbucket.org/petsc/petsc/commits/4f290403fdd060d09d5cb07345cbfd52670e3cbc >>> to the maint, master and next branch that allows ./configure to to go >>> through in this situation. If the change does not break other tests it >>> will be included in the next patch release. >>> >>> Thanks for reporting the problem, >>> >>> Barry >>> >>> This patch does not directly deal with the problem (which i don't >>> understand but seems to be an Apple Xcode problem) but works around the >>> problem on my machine. >> >
