On 20/08/18 14:01, Adrian Croucher wrote:
Should I try wiping out the externalpackages directory as well as $PETSC_ARCH?

I did try this anyway. First it gave the following errors:

Error! missing file: /home/acro018/software/PETSc/code/externalpackages-bak/sowing-1.1.16d/src/sys/makefile Error! missing file: /home/acro018/software/PETSc/code/externalpackages-bak/sowing-1.1.16d/src/doctext/test/makefile Error! missing file: /home/acro018/software/PETSc/code/externalpackages-bak/sowing-1.1.16d/src/bfort/testing/makefile

Not sure if these matter. It continued but then got the same errors trying to build Exodus.

- Adrian

- Adrian

On 20/08/18 14:00, Smith, Barry F. wrote:
    Trying to reproduce it now but I'm pretty sure we've tested it.

    Do you have some old files lying around that might be causing the problem?

/home/acro018/software/PETSc/code/linux-gnu-c-opt/externalpackages/git.exodusii/packages/seacas/libraries/exodus/src/ex_create_par.c:375:9: error: 'netcdf4_mode' undeclared (first use in this function)
      if (netcdf4_mode == -1) {

Maybe externalpackages has downloads from a previous build still located that don't work with the latest exodusii?


    Barry




On Aug 19, 2018, at 8:51 PM, Adrian Croucher <[email protected]> wrote:

hi

I just pulled the latest PETSc master branch (v3.9.3) but am having trouble building it. It's been running fine on v3.8.4.

I deleted my $PETSC_ARCH directory and tried to configure. But it seems to be falling over when trying to build Exodus. I've attached the configure.log.

Any ideas?

- Adrian

--
Dr Adrian Croucher
Senior Research Fellow
Department of Engineering Science
University of Auckland, New Zealand
email: [email protected]
tel: +64 (0)9 923 4611

<configure.log>


--
Dr Adrian Croucher
Senior Research Fellow
Department of Engineering Science
University of Auckland, New Zealand
email: [email protected]
tel: +64 (0)9 923 4611

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