Seems a problem with the MPI install. You could try compiling and running a
same MPI (only) code to see if MPI_Init() then MPI_Finalize() succeed or not.
Barry
> On Mar 11, 2019, at 4:47 PM, Edoardo alinovi <[email protected]>
> wrote:
>
> Thanks Barry for the help as usual.
>
> Attached the errors. Maybe intel is not installed correctly? (I have used the
> gui provided by intel so I do not know if this is the case...)
> ------
>
> Edoardo Alinovi, Ph.D.
>
> DICCA, Scuola Politecnica,
> Universita' degli Studi di Genova,
> 1, via Montallegro,
> 16145 Genova, Italy
>
> Email: [email protected]
> Tel: +39 010 353 2540
>
>
>
>
>
> Il giorno lun 11 mar 2019 alle ore 22:33 Smith, Barry F. <[email protected]>
> ha scritto:
>
> Not good. Run the test manually, then in the debugger to see exactly where
> it is crashing.
>
> cd src/snes/examples/tutorials
> make ex19
> ./ex19
>
> gdb (or the intel debugger) ./ex19
> run
>
> Send all the output
>
>
> > On Mar 11, 2019, at 4:13 PM, Edoardo alinovi via petsc-users
> > <[email protected]> wrote:
> >
> > Dear all,
> >
> > It's a while that I do not write here, hope you are doing all very well!
> >
> > I am compiling petsc with intel, everything seems fine druing configuration
> > and make steps but when I perform the install check I get several errors
> > (attached the log file). Are they dangerous (they are not very
> > encouraging segmentation faults) ? What can I do to fix a bit the thing in
> > the case?
> >
> > Configuration options are:
> >
> > ./configure PETSC_ARCH=arch-intel-opt --with-debugging=no
> > --with-cxx-dialect=C++11 --download-superlu_dist --download-mumps
> > --download-hypre --download-metis --download-parmetis --download-scalapack
> > --with-cc=mpiicc --with-cxx=mpiicpc --with-fc=mpiifort --with-debugging=0
> > COPTFLAGS='-ipo -03 -xHost' CXXOPTFLAGS='-ipo -03 -xHost' FOPTFLAGS='-ipo
> > -03 -xHost' --with-blas-lapack-dir=$HOME/intel/mkl
> > --with-mkl_pardiso-dir=$HOME/intel/mkl
> > --with-mkl_cpardiso-dir=$HOME/intel/mkl
> >
> > The compiler that I m using comes with intel parallel studio 2019.
> >
> > As always every hints is hightly appreciated. Thank you very much!
> >
> > -----
> >
> > Edoardo Alinovi, Ph.D.
> >
> > DICCA, Scuola Politecnica,
> > Universita' degli Studi di Genova,
> > 1, via Montallegro,
> > 16145 Genova, Italy
> >
> > Email: [email protected]
> > Tel: +39 010 353 2540
> >
> >
> >
> >
> > <log.errors>
>
> <ex19.error>
