Perhaps it coming from HWLOC [due to bad X11 setup on this box] Something to try:
HWLOC_COMPONENTS=-opencl,-gl make check Satish On Sun, 24 Apr 2022, Barry Smith wrote: > > Why is this message seemingly being produced for every PETSc executable > run? PETSc, by default, should not be doing anything with X-Windows calls > unless a specific option related to X windows is used even if PETSc is > compiled and linked against X windows. These test runs are not using anything > related to X-Windows. Just having the X windows libraries linked into the > executables should not produce such messages so why are they appearing? > > Barry > > > > > > On Apr 24, 2022, at 7:34 AM, Flavio Riche <[email protected]> wrote: > > > > Hi, > > > > I am new to petsc. When I configure PETSC with > > > > ./configure complex --with-scalar-type=complex --with-cc=gcc --with-cxx=g++ > > --with-fc=gfortran --download-scalapack --download-mumps --download-fftw > > --download-mpich --download-fblaslapack > > > > everything seems to be ok, but when I do > > > > make all check > > > > I find the following error: > > > > Running check examples to verify correct installation > > Using PETSC_DIR=/home/flavio/petsc and PETSC_ARCH=arch-linux-c-debug > > Possible error running C/C++ src/snes/tutorials/ex19 with 1 MPI process > > See http://www.mcs.anl.gov/petsc/documentation/faq.html > > <http://www.mcs.anl.gov/petsc/documentation/faq.html> > > Invalid MIT-MAGIC-COOKIE-1 keylid velocity = 0.0016, prandtl # = 1., > > grashof # = 1. > > Number of SNES iterations = 2 > > Possible error running C/C++ src/snes/tutorials/ex19 with 2 MPI processes > > See http://www.mcs.anl.gov/petsc/documentation/faq.html > > <http://www.mcs.anl.gov/petsc/documentation/faq.html> > > Invalid MIT-MAGIC-COOKIE-1 keyInvalid MIT-MAGIC-COOKIE-1 keylid velocity = > > 0.0016, prandtl # = 1., grashof # = 1. > > Number of SNES iterations = 2 > > 1c1 > > < lid velocity = 0.0625, prandtl # = 1., grashof # = 1. > > --- > > > Invalid MIT-MAGIC-COOKIE-1 keyInvalid MIT-MAGIC-COOKIE-1 keylid velocity > > > = 0.0625, prandtl # = 1., grashof # = 1. > > /home/flavio/petsc/src/snes/tutorials > > Possible problem with ex19 running with mumps, diffs above > > ========================================= > > Possible error running Fortran example src/snes/tutorials/ex5f with 1 MPI > > process > > See http://www.mcs.anl.gov/petsc/documentation/faq.html > > <http://www.mcs.anl.gov/petsc/documentation/faq.html> > > Invalid MIT-MAGIC-COOKIE-1 keyNumber of SNES iterations = 4 > > Completed test examples > > > > I tried to look for solutions at online forums but it didn't help. > > Configure and make logs attached. > > > > > > Best regards, > > > > Flavio > > > > > > > > > > > > -- > > Flavio Riche > > > > <configure.log><make.log> > >
