i test it and now the error is mhc2db=> select t1.sp, t1.pos,t2.p1, t2.p4, t2.p6, t2.p7, t2.p9 from local as t1, precalc as t2 where t1.ce='ACIAD' and idr(t2.p1, t2.p4, t2.p6, t2.p7, t2.p9, 'HLA-DRB5*0101')>2; ERROR: relation "pssms" does not exist CONTEXT: SQL statement "SELECT score from PSSMS where AA= $1 and POS=1 and MOLEC= $2 " PL/pgSQL function "idr" line 11 at select into variables
pssm was a temporary table that i used to calculate the index in precalc table with idr function, should i rebuilt it? the problem is that if i can't use idr as an index it eill be to slow pau 2007/11/29, Richard Huxton < [EMAIL PROTECTED]>: > > Pau Marc Munoz Torres wrote: > > Hi everybody > > > > I'm doing a two table query as follow > > > > mhc2db=> select t1.sp, t1.pos,t2.p1, t2.p4, t2.p6, t2.p7, t2.p9 from > local > > as t1, precalc as t2 where t1.ce='ACIAD' and t2.idr(p1, p4, p6, p7, p9, > > 'HLA-DRB5*0101')>2; > > > > and i get the following error > > > > ERROR: schema "t2" does not exist > > > > but those tables exists!! and are as follow!! > > You have t2.idr(...) which is being read as a function "idr" in schema > "t2". > > Did you mean idr(t2.p1, t2.p4, ...)? > > > -- > Richard Huxton > Archonet Ltd > -- Pau Marc Muñoz Torres Laboratori de Biologia Computacional Institut de Biotecnologia i Biomedicina Vicent Villar Universitat Autonoma de Barcelona E-08193 Bellaterra (Barcelona) telèfon: 93 5812807 Email : [EMAIL PROTECTED]
