I'm quite happy with the speedup in 3, but puzzled over the slowdown in 2.
        Could you provide :

        - SELECT count(*) FROM structure;
        => NRows
        - SELECT avg(length(smiles)) FROM structure;

        Then VACUUM FULL ANALYZE structure
        Redo your timings and this time post EXPLAIN ANALYZE

        Also your query returns 1313 rows, so wan you post :

EXPLAIN ANALYZE SELECT oe_matches(smiles,'c1ccccc1CC(=O)NC') FROM structure;
=> time T1
EXPLAIN ANALYZE SELECT smiles FROM structure;
=> time T2


(T1-T2)/(NRows) will give you an estimate of the time spent in each oe_matches call.

Also note that for postgres (a,b) > (c,d) means ((a>c) and (b>d)), which can be misleading, but I think that's what you wanted.

---------------------------(end of broadcast)---------------------------
TIP 1: subscribe and unsubscribe commands go to [EMAIL PROTECTED]

Reply via email to