Source: hdf5
Version: 1.8.8-2
Severity: important
User: debian-...@superh.org
Usertags: sh4
User: debian-al...@lists.debian.org
Usertags: alpha
X-Debbugs-CC: debian-al...@lists.debian.org, debian-sup...@lists.debian.org
Justification: Fails to build from source

Hi,

hdf5 package FTBFS on alpha and sh4.
  
http://buildd.debian-ports.org/status/fetch.php?pkg=hdf5&arch=alpha&ver=1.8.8-2&stamp=1326937875
  
http://buildd.debian-ports.org/status/fetch.php?pkg=hdf5&arch=sh4&ver=1.8.8-2&stamp=1326966863

alpha:
  _ZN14FL_PacketTable12AppendPacketEPv@Base 1.8.7
- (arch=!amd64 !kfreebsd-amd64 !s390
!s390x)_ZN14FL_PacketTable13AppendPacketsEjPv@Base 1.8.7
- (arch=!i386 !kfreebsd-i386 !hurd-i386 !armel !armhf !alpha !mips
!mipsel !powerpc)_ZN14FL_PacketTable13AppendPacketsEmPv@Base 1.8.7
+#MISSING: 1.8.8-2# (arch=!amd64 !kfreebsd-amd64 !s390
!s390x)_ZN14FL_PacketTable13AppendPacketsEjPv@Base 1.8.7
+ _ZN14FL_PacketTable13AppendPacketsEmPv@Base 1.8.7
  _ZN14FL_PacketTable13GetNextPacketEPv@Base 1.8.7
- (arch=!amd64 !kfreebsd-amd64 !s390
!s390x)_ZN14FL_PacketTable14GetNextPacketsEjPv@Base 1.8.7
- (arch=!i386 !kfreebsd-i386 !hurd-i386 !armel !armhf !alpha !mips
!mipsel !powerpc)_ZN14FL_PacketTable14GetNextPacketsEmPv@Base 1.8.7
+#MISSING: 1.8.8-2# (arch=!amd64 !kfreebsd-amd64 !s390
!s390x)_ZN14FL_PacketTable14GetNextPacketsEjPv@Base 1.8.7
+ _ZN14FL_PacketTable14GetNextPacketsEmPv@Base 1.8.7
  _ZN14FL_PacketTable9GetPacketEyPv@Base 1.8.7
  _ZN14FL_PacketTableC1EiPc@Base 1.8.7
  _ZN14FL_PacketTableC1EiPciyi@Base 1.8.7
dh_makeshlibs: dpkg-gensymbols -plibhdf5-7 -Idebian/libhdf5-7.symbols
-Pdebian/libhdf5-7 returned exit code 1
make: *** [binary-arch] Error 1

sh4:
dpkg-gensymbols: warning: some symbols or patterns disappeared in the
symbols file: see diff output below
dpkg-gensymbols: warning: debian/libhdf5-mpich2-7/DEBIAN/symbols
doesn't match completely debian/libhdf5-mpich2-7.symbols
--- debian/libhdf5-mpich2-7.symbols (libhdf5-mpich2-7_1.8.8-2_sh4)
+++ dpkg-gensymbolszZIgkA       2012-01-19 09:44:43.000000000 +0000
@@ -2147,7 +2147,7 @@
  H5T_conv_ullong_double@Base 1.8.7
  H5T_conv_ullong_float@Base 1.8.7
  H5T_conv_ullong_int@Base 1.8.7
- (arch=!mipsel !armel !armhf !alpha !powerpc)H5T_conv_ullong_ldouble@Base 1.8.7
+#MISSING: 1.8.8-2# (arch=!mipsel !armel !armhf !alpha
!powerpc)H5T_conv_ullong_ldouble@Base 1.8.7
  H5T_conv_ullong_llong@Base 1.8.7
  H5T_conv_ullong_long@Base 1.8.7
  H5T_conv_ullong_schar@Base 1.8.7
dh_makeshlibs: dpkg-gensymbols -plibhdf5-mpich2-7
-Idebian/libhdf5-mpich2-7.symbols -Pdebian/libhdf5-mpich2-7 returned
exit code 1
make: *** [binary-arch] Error 1

Could you update symbol file?

Best regards,
  Nobuhiro

-- 
Nobuhiro Iwamatsu
   iwamatsu at {nigauri.org / debian.org}
   GPG ID: 40AD1FA6



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