Your message dated Sun, 29 Sep 2013 10:03:43 +0000
with message-id <e1vqdqp-0007nf...@franck.debian.org>
and subject line Bug#721805: fixed in hdf5 1.8.11-4
has caused the Debian Bug report #721805,
regarding hdf5 misbehaves when compiled with gcc 4.8.0
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
721805: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=721805
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: hdf5
Version: 1.8.11-3
Severity: important
File: hdf5

As reported by email:

------------------------------------------------------------------------------------------------------

It seems that on some architectures hdf5 has issues when compiled with gcc
4.8.0 and newer compilers.

If the build log include the string "unable to calculate alignment for long
double" (it's present in [1] and [2]) then the build is corrupted.

[1]
https://buildd.debian.org/status/fetch.php?pkg=hdf5&arch=amd64&ver=1.8.11-3%2Bb1&stamp=1377024563
[2]
https://buildd.debian.org/status/fetch.php?pkg=hdf5&arch=i386&ver=1.8.11-3%2Bb1&stamp=1377025110

I am discussing this problem on the hdf-forum mailing list

http://hdf-forum.184993.n3.nabble.com/Issues-with-H5T-NATIVE-LDOUBLE-tt4026450.html

Best wishes,
Andrea

--
Andrea Bedini <andrea.bed...@gmail.com>

------------------------------------------------------------------------------------------------------


-- System Information:
Debian Release: jessie/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (500, 'testing'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 3.9-1-amd64 (SMP w/4 CPU cores)
Locale: LANG=it_IT.UTF-8, LC_CTYPE=it_IT.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

-- 
Francesco P. Lovergine

--- End Message ---
--- Begin Message ---
Source: hdf5
Source-Version: 1.8.11-4

We believe that the bug you reported is fixed in the latest version of
hdf5, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 721...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sylvestre Ledru <sylves...@debian.org> (supplier of updated hdf5 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Sun, 29 Sep 2013 11:12:57 +0200
Source: hdf5
Binary: libhdf5-7 libhdf5-7-dbg libhdf5-dev libhdf5-serial-dev 
libhdf5-openmpi-7 libhdf5-openmpi-dev libhdf5-openmpi-7-dbg libhdf5-mpich2-7 
libhdf5-mpich2-dev libhdf5-mpich2-7-dbg libhdf5-mpi-dev libhdf5-doc 
hdf5-helpers hdf5-tools
Architecture: source all amd64
Version: 1.8.11-4
Distribution: unstable
Urgency: low
Maintainer: Debian GIS Project <pkg-grass-devel@lists.alioth.debian.org>
Changed-By: Sylvestre Ledru <sylves...@debian.org>
Description: 
 hdf5-helpers - Hierarchical Data Format 5 (HDF5) - Helper tools
 hdf5-tools - Hierarchical Data Format 5 (HDF5) - Runtime tools
 libhdf5-7  - Hierarchical Data Format 5 (HDF5) - runtime files - serial versio
 libhdf5-7-dbg - Hierarchical Data Format 5 (HDF5) - Debug package
 libhdf5-dev - Hierarchical Data Format 5 (HDF5) - development files - serial ve
 libhdf5-doc - Hierarchical Data Format 5 (HDF5) - Documentation
 libhdf5-mpi-dev - Hierarchical Data Format 5 (HDF5) - development files - 
MPICH2 ve
 libhdf5-mpich2-7 - Hierarchical Data Format 5 (HDF5) - runtime files - MPICH2 
versio
 libhdf5-mpich2-7-dbg - Hierarchical Data Format 5 (HDF5) - Mpich2 Debug package
 libhdf5-mpich2-dev - Hierarchical Data Format 5 (HDF5) - development files - 
MPICH2 ve
 libhdf5-openmpi-7 - Hierarchical Data Format 5 (HDF5) - runtime files - 
OpenMPI versi
 libhdf5-openmpi-7-dbg - Hierarchical Data Format 5 (HDF5) - OpenMPI Debug 
package
 libhdf5-openmpi-dev - Hierarchical Data Format 5 (HDF5) - development files - 
OpenMPI v
 libhdf5-serial-dev - Hierarchical Data Format 5 (HDF5) - development files - 
transitio
Closes: 687127 721805
Changes: 
 hdf5 (1.8.11-4) unstable; urgency=low
 .
   * Fix a miscompilation issue with gcc 4.8 (Closes: #721805)
   * Rebuild to fix the mod gfortran issue (Closes: #687127)
   * Remove rpath
   * Remove the debian version from libhdf5-7.symbols
   * Fix lintian warning unused-shlib-entry-in-control-file libh5test 7
   * Silent lintian warnings package-name-doesnt-match-sonames
   * Add conflicts on the dbg packages
Checksums-Sha1: 
 c9e51908644bb4ecf4e96f208ee72c29bcff953c 2262 hdf5_1.8.11-4.dsc
 484011fdcbacf313ace514b6f5ed8d5ece17353c 106100 hdf5_1.8.11-4.debian.tar.gz
 0714b1e83c7d63e40ff9f70d53577184a092784d 91454 libhdf5-doc_1.8.11-4_all.deb
 b0e4d9b1c5c6bcb109bfad6c1a6a6e923fe06a20 1222812 libhdf5-7_1.8.11-4_amd64.deb
 55fdfb8dd60c4914ff79c85c65a0e452fbf78d12 2380240 
libhdf5-7-dbg_1.8.11-4_amd64.deb
 ee0ce86ee9f5ac8f4de6f278b370159df8617168 4635700 libhdf5-dev_1.8.11-4_amd64.deb
 750fad67a96681cd26208d04db78d5e5d73fba5c 23244 
libhdf5-serial-dev_1.8.11-4_amd64.deb
 ab681c58cc32109c6c4a2c449af15ccf994d207e 1167582 
libhdf5-openmpi-7_1.8.11-4_amd64.deb
 a6e802c8ed45e9025611608d73b02ae5542a965d 4172942 
libhdf5-openmpi-dev_1.8.11-4_amd64.deb
 c4c6f70d1da690bb078d64e1585dd5ee18e6767f 2071986 
libhdf5-openmpi-7-dbg_1.8.11-4_amd64.deb
 c6b1f3bc4a7ee09603dcdfbab67987504c7d6f9c 1169104 
libhdf5-mpich2-7_1.8.11-4_amd64.deb
 934074cce67f8a634913d001fd13ee35e1de4d2a 4321096 
libhdf5-mpich2-dev_1.8.11-4_amd64.deb
 cf611e37114e8ae28a5a938172fb531243bd84d9 2198542 
libhdf5-mpich2-7-dbg_1.8.11-4_amd64.deb
 6a8bff3243062aa239f2808bfcb4800ddaf43dc1 23264 
libhdf5-mpi-dev_1.8.11-4_amd64.deb
 d76426dd77bb1bd772807fb338291d6f00506087 31198 hdf5-helpers_1.8.11-4_amd64.deb
 a3cc2cbe12a68e4b85c8153a88f835e97bad0cb6 359472 hdf5-tools_1.8.11-4_amd64.deb
Checksums-Sha256: 
 1a26f5fec1a34034ae5d38d0cfd6b4373d97aa5bb56d301763c6bf99970d1982 2262 
hdf5_1.8.11-4.dsc
 145b52c06ff5683146a0093343fca01093f7c13f1d3d03700b5c656d00377f3a 106100 
hdf5_1.8.11-4.debian.tar.gz
 b90af4006f2b08268acc6506ca0163c7cb8105007afb865a5934de6f4ae7776c 91454 
libhdf5-doc_1.8.11-4_all.deb
 ed96c818859b12cbccfb99f95de78d273aba854fca63c0967bcdfaedc7d166b1 1222812 
libhdf5-7_1.8.11-4_amd64.deb
 7513b505da186d8f048757ca7fe4fd6aa72ef7104298d99505a8b10f50070d71 2380240 
libhdf5-7-dbg_1.8.11-4_amd64.deb
 59cb4362ca71af757f780b011402efedb70739ec24f7479899742c2eb0233694 4635700 
libhdf5-dev_1.8.11-4_amd64.deb
 06b2320f38de8da819df7286958c87384cc24c79f7d991783aace6a88968b765 23244 
libhdf5-serial-dev_1.8.11-4_amd64.deb
 49caf9c4805842807906fc6e6d7835a74aa17ae18c5c79c243e59623feb6d10e 1167582 
libhdf5-openmpi-7_1.8.11-4_amd64.deb
 770fb24d49488eb5c34c28d1def826af822ae051e37e3aceec37234c35a45650 4172942 
libhdf5-openmpi-dev_1.8.11-4_amd64.deb
 9065f37b999db6e336ee2f11d6ee4627e394f58776ce020c5325e81da3697b97 2071986 
libhdf5-openmpi-7-dbg_1.8.11-4_amd64.deb
 31f94eaac3fe71beb9c18cd856ee51c54e6c07f6a9f40ac0123b46fa44b4c5b0 1169104 
libhdf5-mpich2-7_1.8.11-4_amd64.deb
 f79bc9df4939ef22edbc15fdacc3d14ad1ff125aca61b399eb2b52cb23de4314 4321096 
libhdf5-mpich2-dev_1.8.11-4_amd64.deb
 0a4d32e2d0be21a2f890a9580bea315270f1648108131b7e312ec0efe51439f1 2198542 
libhdf5-mpich2-7-dbg_1.8.11-4_amd64.deb
 9d1ab6b2c664a96d5db5f1866bbf42370fee274fd2446bcf50b2de7615f8d47f 23264 
libhdf5-mpi-dev_1.8.11-4_amd64.deb
 fc0bdb4081513faad89089e4f3c57c9f5041a4016ae0bce20e4f1cfa1a59bfd8 31198 
hdf5-helpers_1.8.11-4_amd64.deb
 fb6aafac2b09ac126b2c48ebcf3cf6910421a3f6ede98852cd2a58fae4ea601a 359472 
hdf5-tools_1.8.11-4_amd64.deb
Files: 
 31239930cdce60a486408429a633df58 2262 science optional hdf5_1.8.11-4.dsc
 bfda733d03e98a88a0203e56a93f58b3 106100 science optional 
hdf5_1.8.11-4.debian.tar.gz
 7cf57ef2784fc23720f132127b5f2107 91454 doc optional 
libhdf5-doc_1.8.11-4_all.deb
 031e99b5b432f0dd338fe929bb549cea 1222812 libs optional 
libhdf5-7_1.8.11-4_amd64.deb
 9056dbacbadf4d97a94d41135f3c5946 2380240 debug extra 
libhdf5-7-dbg_1.8.11-4_amd64.deb
 808cb28b91cf66c5eb7f164da7681536 4635700 libdevel optional 
libhdf5-dev_1.8.11-4_amd64.deb
 7a6e4cb67a10310da646fbe9ee4405e9 23244 libdevel optional 
libhdf5-serial-dev_1.8.11-4_amd64.deb
 a12c0c001a4c109bb17ae659c6509d46 1167582 libs extra 
libhdf5-openmpi-7_1.8.11-4_amd64.deb
 d88717d5afa9735e09712d3f30646470 4172942 libdevel extra 
libhdf5-openmpi-dev_1.8.11-4_amd64.deb
 0ee7d28fba4036faf4c49f6f18361319 2071986 debug extra 
libhdf5-openmpi-7-dbg_1.8.11-4_amd64.deb
 ccc16f608438cb79f517bba236835d6e 1169104 libs extra 
libhdf5-mpich2-7_1.8.11-4_amd64.deb
 5bb8aadbefc3b63388e3d29a5ea2e0b0 4321096 libdevel extra 
libhdf5-mpich2-dev_1.8.11-4_amd64.deb
 b6421b5d046c7974454d4b18ab71fdf1 2198542 debug extra 
libhdf5-mpich2-7-dbg_1.8.11-4_amd64.deb
 0c838ca42be26e45981012e52f00c549 23264 libdevel extra 
libhdf5-mpi-dev_1.8.11-4_amd64.deb
 51ec60402b750af052219165213a9d82 31198 science optional 
hdf5-helpers_1.8.11-4_amd64.deb
 1602efc1ee80bddb3c17e833097edef4 359472 science optional 
hdf5-tools_1.8.11-4_amd64.deb

-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.12 (GNU/Linux)

iEYEARECAAYFAlJH9xcACgkQiOXXM92JlhBPyQCgmlvR+gZM1Dn1jDR/Y8Li2dGZ
N+EAn13LX9MQelSySDla6vthnrQV9Pqt
=5Yka
-----END PGP SIGNATURE-----

--- End Message ---
_______________________________________________
Pkg-grass-devel mailing list
Pkg-grass-devel@lists.alioth.debian.org
http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel

Reply via email to