Your message dated Fri, 12 Sep 2014 09:06:00 +0000
with message-id <e1xsmno-0001tu...@franck.debian.org>
and subject line Bug#761244: fixed in hdf5 1.8.13+docs-11
has caused the Debian Bug report #761244,
regarding [hdf5-helpers] wrong library path in h5fc
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
761244: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=761244
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: hdf5-helpers
Version: 1.8.13+docs-10
Severity: important
--- Please enter the report below this line. ---
The h5fc compiler wrapper uses a path for libraries that does not match that
of the libraries provided by the libhdf5 package.
The h5cc wrapper has no such problem.
$ h5fc -show
gfortran -g -O2 -fstack-protector-strong -I/usr/include/hdf5/serial -
L/usr/lib/x86_64-linux-gnu/hdf5/_serial /usr/lib/x86_64-linux-
gnu/hdf5/_serial/libhdf5hl_fortran.a /usr/lib/x86_64-linux-
gnu/hdf5/_serial/libhdf5_hl.a /usr/lib/x86_64-linux-
gnu/hdf5/_serial/libhdf5_fortran.a /usr/lib/x86_64-linux-
gnu/hdf5/_serial/libhdf5.a -Wl,-z,relro -lpthread -lz -ldl -lm -Wl,-rpath -
Wl,/usr/lib/x86_64-linux-gnu/hdf5/_serial
$ h5cc -show
/usr/bin/cc -I/usr/include/hdf5/serial -D_LARGEFILE_SOURCE -
D_LARGEFILE64_SOURCE -D_BSD_SOURCE -D_FORTIFY_SOURCE=2 -g -O2 -fstack-
protector-strong -Wformat -Werror=format-security -L/usr/lib/x86_64-linux-
gnu/hdf5/serial /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5_hl.a
/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.a -Wl,-z,relro -lpthread -lz -
ldl -lm -Wl,-rpath -Wl,/usr/lib/x86_64-linux-gnu/hdf5/serial
$ ls /usr/lib/x86_64-linux-gnu/hdf5/_serial/libhdf5hl_fortran.a
ls: cannot access /usr/lib/x86_64-linux-gnu/hdf5/_serial/libhdf5hl_fortran.a:
No such file or directory
$ ls /usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.a
/usr/lib/x86_64-linux-gnu/hdf5/serial/libhdf5.a
(notice the additional underscore in the fortran version: _serial vs. serial)
--- System information. ---
Architecture: amd64
Kernel: Linux 3.16-1-amd64
Debian Release: jessie/sid
990 unstable ftp.debian.org
500 testing ftp.debian.org
500 stable ftp.debian.org
500 stable download.videolan.org
500 saucy ppa.launchpad.net
500 raring ppa.launchpad.net
1 experimental ftp.debian.org
1 experimental cdn.debian.net
--- Package information. ---
Package's Depends field is empty.
Package's Recommends field is empty.
Package's Suggests field is empty.
--- End Message ---
--- Begin Message ---
Source: hdf5
Source-Version: 1.8.13+docs-11
We believe that the bug you reported is fixed in the latest version of
hdf5, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 761...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Gilles Filippini <p...@debian.org> (supplier of updated hdf5 package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 12 Sep 2014 08:01:30 +0200
Source: hdf5
Binary: libhdf5-8 libhdf5-8-dbg libhdf5-cpp-8 libhdf5-cpp-8-dbg libhdf5-dev
libhdf5-openmpi-8 libhdf5-openmpi-dev libhdf5-openmpi-8-dbg libhdf5-mpich-8
libhdf5-mpich-dev libhdf5-mpich2-dev libhdf5-mpich-8-dbg libhdf5-mpi-dev
libhdf5-doc hdf5-helpers hdf5-tools libhdf5-serial-dev
Architecture: source all i386
Version: 1.8.13+docs-11
Distribution: unstable
Urgency: medium
Maintainer: Debian GIS Project <pkg-grass-devel@lists.alioth.debian.org>
Changed-By: Gilles Filippini <p...@debian.org>
Description:
hdf5-helpers - Hierarchical Data Format 5 (HDF5) - Helper tools
hdf5-tools - Hierarchical Data Format 5 (HDF5) - Runtime tools
libhdf5-8 - Hierarchical Data Format 5 (HDF5) - runtime files - serial versio
libhdf5-8-dbg - Hierarchical Data Format 5 (HDF5) - Debug package
libhdf5-cpp-8 - Hierarchical Data Format 5 (HDF5) - C++ libraries
libhdf5-cpp-8-dbg - Hierarchical Data Format 5 (HDF5) - C++ Debug package
libhdf5-dev - Hierarchical Data Format 5 (HDF5) - development files - serial ve
libhdf5-doc - Hierarchical Data Format 5 (HDF5) - Documentation
libhdf5-mpi-dev - Hierarchical Data Format 5 (HDF5) - development files -
default M
libhdf5-mpich-8 - Hierarchical Data Format 5 (HDF5) - runtime files - MPICH2
versio
libhdf5-mpich-8-dbg - Hierarchical Data Format 5 (HDF5) - Mpich Debug package
libhdf5-mpich-dev - Hierarchical Data Format 5 (HDF5) - development files -
MPICH ver
libhdf5-mpich2-dev - Hierarchical Data Format 5 (HDF5) - development files -
MPICH ver
libhdf5-openmpi-8 - Hierarchical Data Format 5 (HDF5) - runtime files -
OpenMPI versi
libhdf5-openmpi-8-dbg - Hierarchical Data Format 5 (HDF5) - OpenMPI Debug
package
libhdf5-openmpi-dev - Hierarchical Data Format 5 (HDF5) - development files -
OpenMPI v
libhdf5-serial-dev - transitional dummy package
Closes: 761244
Changes:
hdf5 (1.8.13+docs-11) unstable; urgency=medium
.
* Fix wrong path in h5fc part of flavor-configure-option.patch
(closes: #761244).
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