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in repository pktools.

commit 424575afb7f066be27579205e454f7701d65c10d
Author: Bas Couwenberg <sebas...@xs4all.nl>
Date:   Wed Jan 28 23:04:41 2015 +0100

    Update man pages with changes in upstream docs.
---
 debian/changelog             |   1 +
 debian/man/pkcomposite.1.xml |  15 +++----
 debian/man/pkfilter.1.xml    | 103 ++++++++++++++++++++++++++-----------------
 3 files changed, 71 insertions(+), 48 deletions(-)

diff --git a/debian/changelog b/debian/changelog
index 809cbc5..45922ef 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -1,6 +1,7 @@
 pktools (2.6.2-1) UNRELEASED; urgency=medium
 
   * New upstream release.
+  * Update man pages with changes in upstream docs.
 
  -- Bas Couwenberg <sebas...@xs4all.nl>  Wed, 28 Jan 2015 09:24:30 +0100
 
diff --git a/debian/man/pkcomposite.1.xml b/debian/man/pkcomposite.1.xml
index d4c8723..ddeda78 100644
--- a/debian/man/pkcomposite.1.xml
+++ b/debian/man/pkcomposite.1.xml
@@ -433,24 +433,23 @@
     </para>
     <para>
       A1. For individual invalid value(s) in input image, use
-      <option>-t</option> (<option>--invalid</option>)
+      <option>-srcnodata</option>
     </para>
     <para>
       Usage: use unique value for each invalid bands set in
-      <option>-vb</option> (<option>--bndnodata</option>) or use a single
-      value that will be applied to all invalid bands
+      <option>--bndnodata</option> or use a single value that
+      will be applied to all invalid bands
     </para>
     <para>
       Example:
       <screen>
-<command>pkcomposite</command> <option>-i</option> 
<replaceable>input1.tif</replaceable> <option>-i</option> 
<replaceable>input2.tif</replaceable> <option>-o</option> 
<replaceable>output.tif</replaceable> <option>-t</option> 
<replaceable>0</replaceable> <option>-t</option> <replaceable>255</replaceable> 
<option>-vb</option> <replaceable>0</replaceable> <option>-vb</option> 
<replaceable>1</replaceable>
+<command>pkcomposite</command> <option>-i</option> 
<replaceable>input1.tif</replaceable> <option>-i</option> 
<replaceable>input2.tif</replaceable> <option>-o</option> 
<replaceable>output.tif</replaceable> <option>-srcnodata</option> 
<replaceable>0</replaceable> <option>-srcnodata</option> 
<replaceable>255</replaceable> <option>-bndnodata</option> 
<replaceable>0</replaceable> <option>-bndnodata</option> 
<replaceable>1</replaceable>
       </screen>
       will consider 0 in band 0 and 255 in band 1 of input images as no value
     </para>
     <para>
       <screen>
-pkcomposite -i input1.tif -i input2.tif -o output.tif -t 0 -vb 0 -vb 1
-<command>pkcomposite</command> <option>-i</option> 
<replaceable>input1.tif</replaceable> <option>-i</option> 
<replaceable>input2.tif</replaceable> <option>-o</option> 
<replaceable>output.tif</replaceable> <option>-t</option> 
<replaceable>0</replaceable> <option>-vb</option> <replaceable>0</replaceable> 
<option>-vb</option> <replaceable>1</replaceable>
+<command>pkcomposite</command> <option>-i</option> 
<replaceable>input1.tif</replaceable> <option>-i</option> 
<replaceable>input2.tif</replaceable> <option>-o</option> 
<replaceable>output.tif</replaceable> <option>-srcnodata</option> 
<replaceable>0</replaceable> <option>-bndnodata</option> 
<replaceable>0</replaceable> <option>-bndnodata</option> 
<replaceable>1</replaceable>
       </screen>
       will consider 0 in both bands 0 and 1 of input images as no value
     </para>
@@ -459,12 +458,12 @@ pkcomposite -i input1.tif -i input2.tif -o output.tif -t 
0 -vb 0 -vb 1
       <option>-min</option> (<option>--min</option>) and
       <option>-max</option> (<option>--max</option>)
       Usage: use unique range set for each invalid bands set in
-      <option>-vb</option> (<option>--bndnodata</option>)
+      <option>-bndnodata</option>
     </para>
     <para>
       Example:
       <screen>
-<command>pkcomposite</command> <option>-i</option> 
<replaceable>input1.tif</replaceable> <option>-i</option> 
<replaceable>input2.tif</replaceable> <option>-o</option> 
<replaceable>output.tif</replaceable> <option>-min</option> 
<replaceable>0</replaceable> <option>-max</option> 
<replaceable>200</replaceable> <option>-min</option> 
<replaceable>0</replaceable> <option>-max</option> <replaceable>2</replaceable> 
<option>-vb</option> <replaceable>0</replaceable> <option>-vb</option> 
<replaceab [...]
+<command>pkcomposite</command> <option>-i</option> 
<replaceable>input1.tif</replaceable> <option>-i</option> 
<replaceable>input2.tif</replaceable> <option>-o</option> 
<replaceable>output.tif</replaceable> <option>-min</option> 
<replaceable>0</replaceable> <option>-max</option> 
<replaceable>200</replaceable> <option>-min</option> 
<replaceable>0</replaceable> <option>-max</option> <replaceable>2</replaceable> 
<option>-bndnodata</option> <replaceable>0</replaceable> 
<option>-bndnodata</opti [...]
       </screen>
       will consider all negative values in band 0 and 1 of input images as
       invalid.
diff --git a/debian/man/pkfilter.1.xml b/debian/man/pkfilter.1.xml
index 2bebec6..3f01b86 100644
--- a/debian/man/pkfilter.1.xml
+++ b/debian/man/pkfilter.1.xml
@@ -17,6 +17,15 @@
       <command>pkfilter</command>
       <arg choice='plain'><option>-i</option> 
<replaceable>input</replaceable></arg>
       <arg choice='plain'><option>-o</option> 
<replaceable>output</replaceable></arg>
+      <group>
+        <arg choice='plain'><option>-f</option> 
<replaceable>filter</replaceable></arg>
+        <arg choice='plain'><option>-srf</option> 
<replaceable>file</replaceable>
+          <arg choice='opt' rep='repeat'><option>-srf</option> 
<replaceable>file</replaceable></arg>
+        </arg>
+        <arg choice='plain'><option>-fwhm</option> 
<replaceable>value</replaceable>
+          <arg choice='opt' rep='repeat'><option>-fwhm</option> 
<replaceable>value</replaceable></arg>
+        </arg>
+      </group>
       <arg choice='opt'><replaceable>options</replaceable></arg>
       <arg choice='opt'><replaceable>advanced options</replaceable></arg>
     </cmdsynopsis>
@@ -33,7 +42,8 @@
       (3, 5, 7, ...).
       You can set the window sizes in X and Y directions separately with the
       options <option>-dx</option> and <option>-dy</option>.
-      A circular kernel (disc) is applied if option <option>-c</option> is set.
+      A circular kernel (disc) is applied if option <option>-circ</option> is
+      set.
       An overview of the supported filters (option
       <option>-f</option>|<option>--filter</option>) is given below.
       You can create customized filters by defining your own filter taps
@@ -91,71 +101,81 @@
       </varlistentry>
 
       <varlistentry>
-        <term><option>-v</option> <replaceable>level</replaceable></term>
-        <term><option>--verbose</option> 
<replaceable>level</replaceable></term>
+        <term><option>-dx</option> <replaceable>value</replaceable></term>
+        <term><option>--dx</option> <replaceable>value</replaceable></term>
         <listitem>
           <para>
-            verbose mode if &gt; 0
+            filter kernel size in x,
+            better use odd value to avoid image shift
           </para>
         </listitem>
       </varlistentry>
 
-    </variablelist>
-    
-    <para>Advanced options</para>
-    <variablelist>
+      <varlistentry>
+        <term><option>-dy</option> <replaceable>value</replaceable></term>
+        <term><option>--dy</option> <replaceable>value</replaceable></term>
+        <listitem>
+          <para>
+            filter kernel size in y,
+            better use odd value to avoid image shift
+          </para>
+        </listitem>
+      </varlistentry>
 
       <varlistentry>
-        <term><option>-circ</option></term>
-        <term><option>--circular</option></term>
+        <term><option>-dz</option> <replaceable>value</replaceable></term>
+        <term><option>--dz</option> <replaceable>value</replaceable></term>
         <listitem>
           <para>
-            circular disc kernel for dilation and erosion
+            filter kernel size in z (band or spectral dimension),
+            must be odd (example: 3).
+            Set dz&gt;0 if 1-D filter must be used in band domain
           </para>
         </listitem>
       </varlistentry>
 
       <varlistentry>
-        <term><option>-r</option> <replaceable>method</replaceable></term>
-        <term><option>--resampling-method</option> 
<replaceable>method</replaceable></term>
+        <term><option>-nodata</option> <replaceable>value</replaceable></term>
+        <term><option>--nodata</option> <replaceable>value</replaceable></term>
         <listitem>
           <para>
-            Resampling method for shifting operation (near: nearest neighbour,
-            bilinear: bi-linear interpolation).
+            nodata value(s) (used for smoothnodata filter) 
           </para>
         </listitem>
       </varlistentry>
 
       <varlistentry>
-        <term><option>-dx</option> <replaceable>value</replaceable></term>
-        <term><option>--dx</option> <replaceable>value</replaceable></term>
+        <term><option>-v</option> <replaceable>level</replaceable></term>
+        <term><option>--verbose</option> 
<replaceable>level</replaceable></term>
         <listitem>
           <para>
-            filter kernel size in x,
-            better use odd value to avoid image shift
+            verbose mode if &gt; 0
           </para>
         </listitem>
       </varlistentry>
 
+    </variablelist>
+    
+    <para>Advanced options</para>
+    <variablelist>
+
       <varlistentry>
-        <term><option>-dy</option> <replaceable>value</replaceable></term>
-        <term><option>--dy</option> <replaceable>value</replaceable></term>
+        <term><option>-circ</option></term>
+        <term><option>--circular</option></term>
         <listitem>
           <para>
-            filter kernel size in y,
-            better use odd value to avoid image shift
+            circular disc kernel for dilation and erosion
           </para>
         </listitem>
       </varlistentry>
 
       <varlistentry>
-        <term><option>-dz</option> <replaceable>value</replaceable></term>
-        <term><option>--dz</option> <replaceable>value</replaceable></term>
+        <term><option>-r</option> <replaceable>method</replaceable></term>
+        <term><option>--resampling-method</option> 
<replaceable>method</replaceable></term>
         <listitem>
           <para>
-            filter kernel size in z (band or spectral dimension),
-            must be odd (example: 3).
-            Set dz&gt;0 if 1-D filter must be used in band domain
+            Resampling method for shifting operation (near: nearest neighbour,
+            bilinear: bi-linear interpolation).
           </para>
         </listitem>
       </varlistentry>
@@ -217,16 +237,6 @@
       </varlistentry>
 
       <varlistentry>
-        <term><option>-nodata</option> <replaceable>value</replaceable></term>
-        <term><option>--nodata</option> <replaceable>value</replaceable></term>
-        <listitem>
-          <para>
-            nodata value(s) (used for smoothnodata filter) 
-          </para>
-        </listitem>
-      </varlistentry>
-
-      <varlistentry>
         <term><option>-tap</option> <replaceable>filename</replaceable></term>
         <term><option>--tap</option> <replaceable>filename</replaceable></term>
         <listitem>
@@ -434,7 +444,7 @@
         Use a circular kernel (instead of rectangular) of size 3x3.
       </para>
       <screen>
-<command>pkfilter</command> <option>-i</option> 
<replaceable>input.tif</replaceable> <option>-o</option> 
<replaceable>filter.tif</replaceable> <option>-dx</option> 
<replaceable>3</replaceable> <option>-dy</option> <replaceable>3</replaceable> 
<option>-f</option> <replaceable>dilate</replaceable> <option>-c</option>
+<command>pkfilter</command> <option>-i</option> 
<replaceable>input.tif</replaceable> <option>-o</option> 
<replaceable>filter.tif</replaceable> <option>-dx</option> 
<replaceable>3</replaceable> <option>-dy</option> <replaceable>3</replaceable> 
<option>-f</option> <replaceable>dilate</replaceable> <option>-circ</option>
       </screen>
 
       <para>
@@ -444,7 +454,7 @@
         dilate cloud values in input image that are flagged as 255
       </para>
       <screen>
-<command>pkfilter</command> <option>-i</option> 
<replaceable>input.tif</replaceable> <option>-o</option> 
<replaceable>filter.tif</replaceable> <option>-dx</option> 
<replaceable>3</replaceable> <option>-dy</option> <replaceable>3</replaceable> 
<option>-class</option> <replaceable>255</replaceable> <option>-f</option> 
<replaceable>dilate</replaceable> <option>-c</option>
+<command>pkfilter</command> <option>-i</option> 
<replaceable>input.tif</replaceable> <option>-o</option> 
<replaceable>filter.tif</replaceable> <option>-dx</option> 
<replaceable>3</replaceable> <option>-dy</option> <replaceable>3</replaceable> 
<option>-class</option> <replaceable>255</replaceable> <option>-f</option> 
<replaceable>dilate</replaceable> <option>-circ</option>
       </screen>
     </example>
 
@@ -472,6 +482,19 @@
       <screen>
 <command>pkfilter</command> <option>-i</option> 
<replaceable>input.tif</replaceable> <option>-o</option> 
<replaceable>filter_stdev.tif</replaceable> <option>-dz</option> 
<replaceable>1</replaceable> <option>-f</option> 
<replaceable>stdev</replaceable>
       </screen>
+
+      <para>
+        "Smooth" (interpolate) nodata in spectral/temporal domain
+        (<option>-dz</option> 1), using a linear interpolation.
+        The following interpolation types are supported:
+        akima (default), linear, polynomial, cspline, cspline_periodic,
+        akima_periodic (please check
+        <ulink 
url="http://www.gnu.org/software/gsl/manual/html_node/Interpolation-Types.html";>gsl</ulink>
+        page for more information on the interpolation types).
+      </para>
+      <screen>
+<command>pkfilter</command> <option>-i</option> 
<replaceable>input.tif</replaceable> <option>-o</option> 
<replaceable>input_smoothed.tif</replaceable> <option>-dz</option> 
<replaceable>1</replaceable> <option>-f</option> 
<replaceable>smoothnodata</replaceable> <option>-interp</option> 
<replaceable>linear</replaceable>
+      </screen>
     </example>
 
   </refsect1>

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