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commit 4465c7b44b0e2d1b327889f6fb59acea4a331bf1 Merge: 7c81177 4aac6c9 Author: Emmanuel Bourg <[email protected]> Date: Thu Jul 30 01:27:54 2015 +0200 Merge tag 'upstream/2.8.0' Upstream version 2.8.0 DEPENDENCIES | 36 +- PearPackagingMavenPlugin/pom.xml | 8 +- README | 35 +- RELEASE_NOTES.html | 153 +- aggregate-uimaj-docbooks/pom.xml | 8 +- aggregate-uimaj-eclipse-plugins/pom.xml | 8 +- aggregate-uimaj/pom.xml | 8 +- issuesFixed/jira-report.html | 430 +-- jVinci/pom.xml | 8 +- jcasgen-maven-plugin/pom.xml | 2 +- pom.xml | 10 +- uima-docbook-overview-and-setup/pom.xml | 8 +- .../src/docbook/eclipse_setup.xml | 25 +- .../src/docbook/faqs.xml | 10 +- uima-docbook-references/pom.xml | 8 +- uima-docbook-references/src/docbook/ref.config.xml | 18 + .../src/docbook/ref.xml.component_descriptor.xml | 9 +- uima-docbook-tools/pom.xml | 8 +- .../images/tools/tools.doc_analyzer/image006v2.png | Bin 0 -> 59507 bytes .../tools/tools.doc_analyzer/image007-1v2.png | Bin 0 -> 57667 bytes .../tools/tools.doc_analyzer/image007-2v2.png | Bin 0 -> 56680 bytes .../tools/tools.doc_analyzer/image007-3v2.png | Bin 0 -> 56225 bytes .../images/tools/tools.doc_analyzer/image007.jpg | Bin 0 -> 142429 bytes .../src/docbook/tools.doc_analyzer.xml | 73 +- uima-docbook-tools/src/docbook/tools.jcasgen.xml | 3 +- .../src/docbook/tools.pear.packager.maven.xml | 8 +- uima-docbook-tutorials-and-users-guides/pom.xml | 8 +- uimaj-adapter-soap/pom.xml | 8 +- uimaj-adapter-vinci/pom.xml | 8 +- uimaj-bootstrap/pom.xml | 8 +- uimaj-component-test-util/pom.xml | 8 +- ...marker-file-identifying-api-compatibility-check | 1 + uimaj-core/pom.xml | 17 +- .../impl/AnalysisEngineManagementImpl.java | 139 +- .../src/main/java/org/apache/uima/cas/CAS.java | 25 +- .../src/main/java/org/apache/uima/cas/FSIndex.java | 6 + .../org/apache/uima/cas/FSIndexRepository.java | 24 +- .../main/java/org/apache/uima/cas/FSIterator.java | 3 +- .../apache/uima/cas/impl/AnnotationBaseImpl.java | 7 +- .../org/apache/uima/cas/impl/AnnotationImpl.java | 7 +- .../apache/uima/cas/impl/AnnotationIndexImpl.java | 37 +- .../org/apache/uima/cas/impl/ArrayFSGenerator.java | 5 +- .../org/apache/uima/cas/impl/BinaryCasSerDes4.java | 2 +- .../org/apache/uima/cas/impl/BinaryCasSerDes6.java | 12 +- .../apache/uima/cas/impl/BooleanArrayFSImpl.java | 7 +- .../org/apache/uima/cas/impl/ByteArrayFSImpl.java | 6 +- .../java/org/apache/uima/cas/impl/ByteHeap.java | 8 + .../java/org/apache/uima/cas/impl/CASImpl.java | 115 +- .../org/apache/uima/cas/impl/CommonAuxHeap.java | 110 +- .../apache/uima/cas/impl/DoubleArrayFSImpl.java | 7 +- .../java/org/apache/uima/cas/impl/FSBagIndex.java | 255 +- .../org/apache/uima/cas/impl/FSClassRegistry.java | 27 +- .../java/org/apache/uima/cas/impl/FSGenerator.java | 4 +- .../uima/cas/impl/FSIndexComparatorImpl.java | 8 + .../java/org/apache/uima/cas/impl/FSIndexFlat.java | 688 +++++ .../java/org/apache/uima/cas/impl/FSIndexImpl.java | 10 +- .../uima/cas/impl/FSIndexRepositoryImpl.java | 1840 +++++++++---- .../org/apache/uima/cas/impl/FSIntArrayIndex.java | 261 +- .../uima/cas/impl/FSIntIteratorImplBase.java | 137 + .../apache/uima/cas/impl/FSIteratorAggregate.java | 32 +- .../apache/uima/cas/impl/FSIteratorImplBase.java | 48 +- .../apache/uima/cas/impl/FSIteratorWrapper.java | 29 +- .../cas/impl/FSIteratorWrapperDoubleCheck.java | 156 ++ .../org/apache/uima/cas/impl/FSLeafIndexImpl.java | 79 +- .../java/org/apache/uima/cas/impl/FSRBTIndex.java | 264 +- .../org/apache/uima/cas/impl/FSRBTSetIndex.java | 37 +- .../org/apache/uima/cas/impl/FSVectorIndex.java | 314 --- .../apache/uima/cas/impl/FeatureStructureImpl.java | 24 +- .../org/apache/uima/cas/impl/FilteredIterator.java | 46 +- .../main/java/org/apache/uima/cas/impl/Heap.java | 54 +- .../org/apache/uima/cas/impl/IntArrayFSImpl.java | 6 +- .../org/apache/uima/cas/impl/IntIterator4bag.java | 108 + .../org/apache/uima/cas/impl/IntIterator4set.java | 126 + .../apache/uima/cas/impl/IntIterator4sorted.java | 180 ++ .../org/apache/uima/cas/impl/LongArrayFSImpl.java | 6 +- .../java/org/apache/uima/cas/impl/LongHeap.java | 8 + .../java/org/apache/uima/cas/impl/LowLevelCAS.java | 3 +- .../org/apache/uima/cas/impl/LowLevelIterator.java | 2 +- .../uima/cas/impl/LowLevelIteratorWrapper.java | 93 - .../java/org/apache/uima/cas/impl/ShortHeap.java | 8 + .../java/org/apache/uima/cas/impl/SofaFSImpl.java | 6 +- .../apache/uima/cas/impl/StringArrayFSImpl.java | 6 +- .../java/org/apache/uima/cas/impl/Subiterator.java | 573 +++- .../org/apache/uima/cas/impl/TypeSystemImpl.java | 156 +- .../uima/cas/impl/UnambiguousIteratorImpl.java | 214 -- .../apache/uima/cas/impl/XmiCasDeserializer.java | 33 +- .../java/org/apache/uima/cas/impl/package.html | 122 +- .../org/apache/uima/cas/text/AnnotationIndex.java | 27 +- .../org/apache/uima/cas/text/AnnotationTree.java | 2 +- .../org/apache/uima/impl/UimaContext_ImplBase.java | 3 +- .../src/main/java/org/apache/uima/impl/Util.java | 6 +- .../util/ComparableIntPointerIterator.java | 25 +- .../internal/util/Int2IntArrayMapFixedSize.java | 75 + .../apache/uima/internal/util/Int2IntHashMap.java | 5 + .../apache/uima/internal/util/IntArrayUtils.java | 2 +- .../org/apache/uima/internal/util/IntBitSet.java | 4 +- .../org/apache/uima/internal/util/IntHashSet.java | 8 +- .../apache/uima/internal/util/IntListIterator.java | 3 +- .../uima/internal/util/IntPointerIterator.java | 3 +- .../java/org/apache/uima/internal/util/IntSet.java | 11 +- .../org/apache/uima/internal/util/IntVector.java | 2 +- .../apache/uima/internal/util/ResourcePool.java | 16 +- .../apache/uima/internal/util/UIMAClassLoader.java | 86 +- .../util/{MutableInteger.java => Utilities.java} | 16 +- .../internal/util/rb_trees/CompIntArrayRBT.java | 145 +- .../uima/internal/util/rb_trees/Int2IntRBT.java | 43 +- .../uima/internal/util/rb_trees/IntArrayRBT.java | 615 ++--- .../internal/util/rb_trees/IntArrayRBTcommon.java | 377 +-- .../src/main/java/org/apache/uima/jcas/JCas.java | 96 +- .../java/org/apache/uima/jcas/JCasRegistry.java | 10 +- .../org/apache/uima/jcas/JFSIndexRepository.java | 23 +- .../apache/uima/jcas/cas/AnnotationBase_Type.java | 41 +- .../apache/uima/jcas/cas/BooleanArray_Type.java | 45 +- .../org/apache/uima/jcas/cas/ByteArray_Type.java | 49 +- .../org/apache/uima/jcas/cas/DoubleArray_Type.java | 49 +- .../org/apache/uima/jcas/cas/EmptyFSList_Type.java | 41 +- .../apache/uima/jcas/cas/EmptyFloatList_Type.java | 41 +- .../uima/jcas/cas/EmptyIntegerList_Type.java | 41 +- .../apache/uima/jcas/cas/EmptyStringList_Type.java | 41 +- .../org/apache/uima/jcas/cas/FSArray_Type.java | 48 +- .../java/org/apache/uima/jcas/cas/FSList_Type.java | 42 +- .../org/apache/uima/jcas/cas/FloatArray_Type.java | 40 +- .../org/apache/uima/jcas/cas/FloatList_Type.java | 42 +- .../apache/uima/jcas/cas/IntegerArray_Type.java | 46 +- .../org/apache/uima/jcas/cas/IntegerList_Type.java | 42 +- .../org/apache/uima/jcas/cas/LongArray_Type.java | 45 +- .../apache/uima/jcas/cas/NonEmptyFSList_Type.java | 42 +- .../uima/jcas/cas/NonEmptyFloatList_Type.java | 41 +- .../uima/jcas/cas/NonEmptyIntegerList_Type.java | 41 +- .../uima/jcas/cas/NonEmptyStringList_Type.java | 42 +- .../org/apache/uima/jcas/cas/ShortArray_Type.java | 45 +- .../java/org/apache/uima/jcas/cas/Sofa_Type.java | 45 +- .../org/apache/uima/jcas/cas/StringArray_Type.java | 46 +- .../org/apache/uima/jcas/cas/StringList_Type.java | 42 +- .../java/org/apache/uima/jcas/cas/TOP_Type.java | 48 +- .../org/apache/uima/jcas/impl/JCasHashMap.java | 159 +- .../java/org/apache/uima/jcas/impl/JCasImpl.java | 172 +- .../uima/jcas/impl/JFSIndexRepositoryImpl.java | 22 +- .../java/org/apache/uima/jcas/tcas/Annotation.java | 26 +- .../org/apache/uima/jcas/tcas/Annotation_Type.java | 59 +- .../apache/uima/resource/impl/CasManager_impl.java | 10 +- .../metadata/impl/MetaDataObject_impl.java | 10 +- .../metadata/impl/TypePriorityList_impl.java | 2 +- .../main/java/org/apache/uima/util/CasCopier.java | 28 + .../impl/AnalysisEngineDescription_implTest.java | 3 +- .../impl/AnalysisEngineManagementImplTest.java | 66 + .../impl/AnalysisEngine_implTest.java | 19 +- .../MultiprocessingAnalysisEngine_implTest.java | 260 +- .../uima/cas/impl/BinaryCasSerDesPerformance.java | 78 + .../java/org/apache/uima/cas/impl/CasPoolTest.java | 3 +- .../apache/uima/cas/impl/CasResetResizeTest.java | 64 +- .../apache/uima/cas/impl/CommonAuxHeapTest.java | 106 + .../uima/cas/impl/UnambiguousIteratorTest.java | 5 + .../uima/cas/impl/XmiCasDeserializerTest.java | 70 +- .../uima/cas/test/AnnotationIteratorTest.java | 274 +- .../apache/uima/cas/test/FilteredIteratorTest.java | 251 +- .../apache/uima/cas/test/IndexComparitorTest.java | 6 +- .../org/apache/uima/cas/test/IteratorTest.java | 133 +- .../org/apache/uima/cas/test/SubiteratorTest.java | 25 +- .../org/apache/uima/cas_data/impl/CasComparer.java | 394 ++- .../uima/cas_data/impl/CasComparerViewChange.java | 63 - .../uima/internal/util/AnalysisEnginePoolTest.java | 32 +- .../uima/internal/util/MultiThreadUtils.java | 386 ++- .../uima/internal/util/UIMAClassLoaderTest.java | 41 +- .../internal/util/rb_trees/Int2IntRBTtest.java | 5 +- .../internal/util/rb_trees/IntArrayRBTtest.java | 225 +- .../uima/jcas/impl/JCasHashMapCompareTest.java | 5 +- .../org/apache/uima/jcas/impl/JCasHashMapTest.java | 108 +- .../java/org/apache/uima/util/CasCopierTest.java | 34 +- .../uima/util/impl/JSR47Logger_implTest.java | 1 - uimaj-cpe/checkpoint.dat | Bin 1361 -> 1361 bytes uimaj-cpe/checkpoint.dat.prev | Bin 1368 -> 1368 bytes ...marker-file-identifying-api-compatibility-check | 1 + uimaj-cpe/pom.xml | 9 +- uimaj-document-annotation/pom.xml | 8 +- uimaj-eclipse-feature-runtime/feature.xml | 4 +- uimaj-eclipse-feature-runtime/pom.xml | 8 +- uimaj-eclipse-feature-tools/feature.xml | 18 +- uimaj-eclipse-feature-tools/pom.xml | 8 +- uimaj-eclipse-update-site/pom.xml | 28 +- uimaj-ep-cas-editor-ide/META-INF/MANIFEST.MF | 28 +- uimaj-ep-cas-editor-ide/pom.xml | 8 +- uimaj-ep-cas-editor/META-INF/MANIFEST.MF | 42 +- uimaj-ep-cas-editor/pom.xml | 8 +- uimaj-ep-configurator/META-INF/MANIFEST.MF | 28 +- uimaj-ep-configurator/pom.xml | 8 +- uimaj-ep-debug/META-INF/MANIFEST.MF | 12 +- uimaj-ep-debug/pom.xml | 8 +- uimaj-ep-jcasgen/META-INF/MANIFEST.MF | 12 +- uimaj-ep-jcasgen/pom.xml | 8 +- uimaj-ep-launcher/META-INF/MANIFEST.MF | 12 +- uimaj-ep-launcher/pom.xml | 8 +- uimaj-ep-pear-packager/META-INF/MANIFEST.MF | 18 +- uimaj-ep-pear-packager/pom.xml | 8 +- uimaj-ep-runtime/META-INF/MANIFEST.MF | 140 +- uimaj-ep-runtime/pom.xml | 8 +- uimaj-examples/pom.xml | 8 +- uimaj-jet-expander/Readme.txt | 3 + ...marker-file-identifying-api-compatibility-check | 1 + uimaj-json/pom.xml | 11 +- uimaj-parent/pom.xml | 69 +- uimaj-test-util/pom.xml | 8 +- uimaj-tools/pom.xml | 8 +- .../tools/docanalyzer/AnnotationViewerDialog.java | 6 +- .../uima/tools/viewer/CasAnnotationViewer.java | 2813 +++++++++++++------- 205 files changed, 10460 insertions(+), 6117 deletions(-) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/pkg-java/uimaj.git _______________________________________________ pkg-java-commits mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-java-commits
