Pierre Gruet pushed to branch master at Debian Java Maintainers / jalview
Commits: 2aa13a54 by Pierre Gruet at 2022-02-22T17:40:29+01:00 Depending on libbiojava5-java instead of libbiojava4-java - - - - - 979e43fc by Pierre Gruet at 2022-02-22T20:40:04+01:00 Upload to unstable - - - - - 4 changed files: - debian/changelog - debian/control - debian/jalview.manifest - debian/pom.xml Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,9 @@ +jalview (2.11.1.4+dfsg-3) unstable; urgency=medium + + * Depending on libbiojava5-java instead of libbiojava4-java + + -- Pierre Gruet <[email protected]> Tue, 22 Feb 2022 17:40:38 +0100 + jalview (2.11.1.4+dfsg-2) unstable; urgency=medium * Correcting the BS package in dependency jmol, adding versioned dependency ===================================== debian/control ===================================== @@ -12,7 +12,7 @@ Build-Depends: debhelper-compat (= 13), javahelper, libapache-mime4j-java (>= 0.7.2), libaxis-java, - libbiojava4-java, + libbiojava5-java, libhtsjdk-java, libhttpclient-java, libhttpcore-java, ===================================== debian/jalview.manifest ===================================== @@ -1,3 +1,3 @@ usr/share/java/jalview.jar: - Class-Path: /usr/share/java/min-jaba-client.jar /usr/share/java/jersey1-client.jar /usr/share/java/jersey1-core.jar /usr/share/java/vamsas-client.jar /usr/share/java/varna.jar /usr/share/java/groovy-all.jar /usr/share/java/htsjdk.jar /usr/share/java/intervalstorej.jar /usr/share/java/miglayout.jar /usr/share/java/axis-jaxrpc.jar /usr/share/java/axis.jar /usr/share/java/httpmime.jar /usr/share/java/httpcore.jar /usr/share/java/httpclient.jar /usr/share/java/apache-mime4j-core.jar /usr/share/java/log4j-1.2.jar /usr/share/java/biojava4-ontology.jar /usr/share/java/jetty9-server.jar /usr/share/java/jetty9-util.jar /usr/share/java/org.jfree.svg.jar /usr/share/java/Jmol.jar /usr/share/java/json-simple.jar /usr/share/java/jsoup.jar /usr/share/java/jswingreader.jar /usr/share/java/jh.jar /usr/share/java/slf4j-api.jar /usr/share/java/jaxrs-api.jar /usr/share/java/commons-discovery.jar /usr/share/java/jaxws-rt.jar + Class-Path: /usr/share/java/min-jaba-client.jar /usr/share/java/jersey1-client.jar /usr/share/java/jersey1-core.jar /usr/share/java/vamsas-client.jar /usr/share/java/varna.jar /usr/share/java/groovy-all.jar /usr/share/java/htsjdk.jar /usr/share/java/intervalstorej.jar /usr/share/java/miglayout.jar /usr/share/java/axis-jaxrpc.jar /usr/share/java/axis.jar /usr/share/java/httpmime.jar /usr/share/java/httpcore.jar /usr/share/java/httpclient.jar /usr/share/java/apache-mime4j-core.jar /usr/share/java/log4j-1.2.jar /usr/share/java/biojava5-ontology.jar /usr/share/java/jetty9-server.jar /usr/share/java/jetty9-util.jar /usr/share/java/org.jfree.svg.jar /usr/share/java/Jmol.jar /usr/share/java/json-simple.jar /usr/share/java/jsoup.jar /usr/share/java/jswingreader.jar /usr/share/java/jh.jar /usr/share/java/slf4j-api.jar /usr/share/java/jaxrs-api.jar /usr/share/java/commons-discovery.jar /usr/share/java/jaxws-rt.jar Main-Class: jalview.bin.Launcher ===================================== debian/pom.xml ===================================== @@ -184,10 +184,8 @@ </dependency> <dependency> <groupId>org.biojava</groupId> - <artifactId>biojava4-ontology</artifactId> - <version>debian</version> - <scope>system</scope> - <systemPath>/usr/share/java/biojava4-ontology.jar</systemPath> + <artifactId>biojava5-ontology</artifactId> + <version>5.x</version> </dependency> <dependency> <groupId>org.eclipse.jetty</groupId> View it on GitLab: https://salsa.debian.org/java-team/jalview/-/compare/6bb75c2f8519b315762e72a4d6b163049c225603...979e43fc2731d244d63b3f020e01c2be12ea8f66 -- View it on GitLab: https://salsa.debian.org/java-team/jalview/-/compare/6bb75c2f8519b315762e72a4d6b163049c225603...979e43fc2731d244d63b3f020e01c2be12ea8f66 You're receiving this email because of your account on salsa.debian.org.
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