Pierre Gruet pushed to branch master at Debian Java Maintainers / jalview
Commits: e04cdfce by Pierre Gruet at 2023-01-12T17:40:32+01:00 Depending on biojava6 instead of biojava5 - - - - - bda5f52a by Pierre Gruet at 2023-01-12T17:41:02+01:00 Raising Standards version to 4.6.2 (no change) - - - - - babd3e90 by Pierre Gruet at 2023-01-12T17:41:16+01:00 Updating changelog - - - - - 44c28212 by Pierre Gruet at 2023-01-12T21:03:53+01:00 Set upstream metadata fields: Repository-Browse. Changes-By: lintian-brush - - - - - 71a9681c by Pierre Gruet at 2023-01-12T21:04:19+01:00 Upload to unstable - - - - - 6 changed files: - debian/changelog - debian/control - debian/jalview.manifest - debian/pom.xml - debian/rules - debian/upstream/metadata Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,11 @@ +jalview (2.11.2.5+dfsg-2) unstable; urgency=medium + + * Depending on biojava6 instead of biojava5 + * Raising Standards version to 4.6.2 (no change) + * Set upstream metadata fields: Repository-Browse. + + -- Pierre Gruet <[email protected]> Thu, 12 Jan 2023 21:04:14 +0100 + jalview (2.11.2.5+dfsg-1) unstable; urgency=medium * New upstream version 2.11.2.5+dfsg ===================================== debian/control ===================================== @@ -13,7 +13,7 @@ Build-Depends-Indep: groovy, javahelp2, libapache-mime4j-java, libaxis-java, - libbiojava5-java, + libbiojava6-java, libhtsjdk-java, libhttpclient-java, libhttpcore-java, @@ -39,7 +39,7 @@ Build-Depends-Indep: groovy, varna, libandroid-json-org-java <!nocheck>, testng <!nocheck> -Standards-Version: 4.6.1 +Standards-Version: 4.6.2 Vcs-Git: https://salsa.debian.org/java-team/jalview.git Vcs-Browser: https://salsa.debian.org/java-team/jalview Homepage: https://www.jalview.org ===================================== debian/jalview.manifest ===================================== @@ -1,3 +1,3 @@ usr/share/java/jalview.jar: - Class-Path: /usr/share/java/apache-mime4j-core.jar /usr/share/java/axis.jar /usr/share/java/axis-jaxrpc.jar /usr/share/java/biojava5-ontology.jar /usr/share/java/commons-discovery.jar /usr/share/java/groovy-all.jar /usr/share/java/htsjdk.jar /usr/share/java/httpclient.jar /usr/share/java/httpcore.jar /usr/share/java/httpmime.jar /usr/share/java/intervalstorej.jar /usr/share/java/jaxb-api.jar /usr/share/java/jaxb-impl.jar /usr/share/java/jaxrs-api.jar /usr/share/java/jaxws-rt.jar /usr/share/java/jersey1-client.jar /usr/share/java/jersey1-core.jar /usr/share/java/jetty9-server.jar /usr/share/java/jetty9-util.jar /usr/share/java/jh.jar /usr/share/java/Jmol.jar /usr/share/java/json.jar /usr/share/java/json-simple.jar /usr/share/java/jsoup.jar /usr/share/java/jswingreader.jar /usr/share/java/log4j-1.2.jar /usr/share/java/log4j-api.jar /usr/share/java/log4j-core.jar /usr/share/java/miglayout.jar /usr/share/java/min-jaba-client.jar /usr/share/java/org.jfree.svg.jar /usr/share/java/slf4j-api.jar /usr/share/java/vamsas-client.jar /usr/share/java/varna.jar + Class-Path: /usr/share/java/apache-mime4j-core.jar /usr/share/java/axis.jar /usr/share/java/axis-jaxrpc.jar /usr/share/java/biojava6-ontology.jar /usr/share/java/commons-discovery.jar /usr/share/java/groovy-all.jar /usr/share/java/htsjdk.jar /usr/share/java/httpclient.jar /usr/share/java/httpcore.jar /usr/share/java/httpmime.jar /usr/share/java/intervalstorej.jar /usr/share/java/jaxb-api.jar /usr/share/java/jaxb-impl.jar /usr/share/java/jaxrs-api.jar /usr/share/java/jaxws-rt.jar /usr/share/java/jersey1-client.jar /usr/share/java/jersey1-core.jar /usr/share/java/jetty9-server.jar /usr/share/java/jetty9-util.jar /usr/share/java/jh.jar /usr/share/java/Jmol.jar /usr/share/java/json.jar /usr/share/java/json-simple.jar /usr/share/java/jsoup.jar /usr/share/java/jswingreader.jar /usr/share/java/log4j-1.2.jar /usr/share/java/log4j-api.jar /usr/share/java/log4j-core.jar /usr/share/java/miglayout.jar /usr/share/java/min-jaba-client.jar /usr/share/java/org.jfree.svg.jar /usr/share/java/slf4j-api.jar /usr/share/java/vamsas-client.jar /usr/share/java/varna.jar Main-Class: jalview.bin.Launcher ===================================== debian/pom.xml ===================================== @@ -184,7 +184,7 @@ </dependency> <dependency> <groupId>org.biojava</groupId> - <artifactId>biojava5-ontology</artifactId> + <artifactId>biojava6-ontology</artifactId> <version>5.x</version> </dependency> <dependency> ===================================== debian/rules ===================================== @@ -7,7 +7,7 @@ export LC_ALL=C.UTF-8 DEBIAN_JARS=/usr/share/java/apache-mime4j-core.jar \ /usr/share/java/axis.jar \ /usr/share/java/axis-jaxrpc.jar \ - /usr/share/java/biojava5-ontology.jar \ + /usr/share/java/biojava6-ontology.jar \ /usr/share/java/commons-discovery.jar \ /usr/share/java/groovy-all.jar \ /usr/share/java/htsjdk.jar \ ===================================== debian/upstream/metadata ===================================== @@ -35,4 +35,4 @@ Registry: - Name: conda:bioconda Entry: jalview Bug-Submit: https://issues.jalview.org/secure/Dashboard.jspa -Repository-Browse: http://source.jalview.org/gitweb/?p=jalview.git;a=summary +Repository-Browse: https://source.jalview.org/gitweb/?p=jalview.git;a=summary View it on GitLab: https://salsa.debian.org/java-team/jalview/-/compare/6ac58fc92d47fe37ea4edb4be339b87a6b0c2f82...71a9681c813a8f1c873864f960dad46f3e3f29d1 -- View it on GitLab: https://salsa.debian.org/java-team/jalview/-/compare/6ac58fc92d47fe37ea4edb4be339b87a6b0c2f82...71a9681c813a8f1c873864f960dad46f3e3f29d1 You're receiving this email because of your account on salsa.debian.org.
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