bash-3.2$ autoconf-2.61
m4: unexpected end of input, unclosed parenthesis:
   configure.ac at line 5
autom4te-2.61: /usr/bin/m4 failed with exit status: 1

Relevant code:
m4_define(WINE_VERSION,regexp(m4_include(VERSION),[version
\([-.0-9A-Za-z]+\)],[\1]))

Removing that line allows autoconf to work fine after that.

Let me know if you need any further information.

-- 
-Austin

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