The Perils of Cloning
Wednesday, Jul. 05, 2006 

By ALICE PARK 

 
Clone: Ten years after Dolly's birth, scientists are learning that clones may 
not be such perfect copies after all


ILLUSTRATION FOR TIME BY ANTHONY FREDA
 

It was 10 years ago this week, on a warm July night, that a newborn lamb with 
an unique pedigree took her first breath in a small shed tucked in the Scottish 
hills a few miles south of Edinburgh. From the outside, she looked no different 
from thousands of other sheep born each summer on surrounding farms. But Dolly, 
as the world soon came to realize, was no ordinary lamb. She was cloned from a 
single mammary cell of an adult ewe, overturning long-held scientific dogma 
that had declared such a thing biologically impossible. Her birth set off a 
race in laboratories around the world to duplicate the breakthrough. It also 
raised the specter--however distant--of human cloning.

A decade later, scientists are starting to come to grips with just how 
different Dolly was. Dozens of animals have been cloned since that first little 
lamb--mice, cats, cows, pigs, horses and, most recently, a dog--and it's 
becoming increasingly clear that they are all, in one way or another, defective.
It's tempting to think of clones as perfect carbon copies of the original--down 
to every hair and quirk of temperament. It turns out, though, that there are 
various degrees of genetic replication. That may come as a rude shock to people 
who have paid thousands of dollars to clone a pet cat only to discover that 
their new kitten looks and behaves nothing like their beloved pet--with a 
different-color coat of fur, perhaps, or a completely different attitude toward 
its human hosts.

And these are just the obvious differences. Not only are clones separated from 
the original template by time--in Dolly's case, six years--but they are also 
the product of an unnatural molecular mechanism that turns out not to be very 
good at making identical copies. In fact, the process can embed small flaws in 
the genomes of clones that scientists are only now discovering. The more 
scientists have learned about the inner workings of the procedure that created 
Dolly, the more they are amazed that she survived at all.

"We are still surprised that cloning works," says Ian Wilmut, the embryologist 
who led the team that created Dolly. Ten years and 15 mammalian species later, 
the efficiency of the process is no better than it was at Dolly's birth: only 
2% to 5% of the eggs that start out as clones end up as live animals. For each 
clone born, hundreds of others never make it past their first days and weeks, 
the victims of defects in development too severe to allow them to survive.

Clones are vulnerable throughout the cloning process, from their first days in 
a culture dish to their final moments in the womb to their first weeks after 
birth. (By contrast, embryos created by in vitro fertilization, which also 
start out in a petri dish, are pretty much home free if they make it past the 
first month in the womb.) Dolly, in fact, was the sole survivor of 277 cloning 
attempts. Clones, as the scientists who make them are fond of saying, are the 
exception rather than the rule.

It's not hard to appreciate why. Mammalian cloning is an intricate process 
involving at least three animals, hundreds of eggs, hundreds of more mature 
cells and not a single sperm. The key challenge is to undo the development of 
an adult cell--which, like all cells, contains in its DNA the genetic blueprint 
of the entire organism--that has been programmed or "differentiated" to be one 
kind of cell (skin or bone or nerve) and no other kind. Somehow, scientists 
must trick this mature, fully developed cell into resetting its genetic clock 
so that it can begin life anew as an embryo.

The process by which that is achieved is called nuclear transfer. The first 
step is to remove the nucleus from an egg and replace it with the nucleus of an 
adult cell (in Dolly's case, a cell from a ewe's udder). The two components are 
electrically fused and chemically activated to trick the hybrid cell into 
dividing like an embryo. Not surprisingly, the process doesn't always go right. 
"I call it a lottery," says Wilmut. "Even if you use the same method as 
consistently as you can, you may get some clones with severe abnormalities and 
some that have only minor ones."
The most common defect--seen across most of the species that have been cloned 
so far--is a condition known as large-offspring syndrome. Those clones are born 
larger than normal and have trouble breathing in their first few weeks. Most of 
the surrogates that gave birth to them experience prolonged pregnancies and 
sluggish, difficult labors, which may have something to do with their distended 
and enlarged placentas. Some of Wilmut's cloned sheep were born with incomplete 
body walls, with muscles and skin around their abdomen that failed to properly 
join. Other scientists have reported abnormalities in kidney and brain 
function. In still other clones, the heart does not develop normally, and the 
walls that are supposed to separate fresh blood from deoxygenated blood do not 
form.

The good news, as far as cloning's future is concerned, is that those problems 
seem to be limited to the clones and are not passed on to the next generation. 
When clones mate with ordinary animals, their offspring are created by the 
natural merging of egg and sperm--not by the reprogramming of a mature 
cell--which may erase any reprogramming errors in the clone. The proof is that 
Dolly gave birth to five healthy lambs. Cloned cows, pigs and mice are also 
bearing normal offspring. But when clones mate with other clones, all bets are 
off. Mice created this way appear to accumulate more abnormalities with each 
generation.

Most of the errors in reprogramming, scientists say, can be traced to a process 
known as DNA methylation. During normal development, molecules called methyl 
groups attach themselves to DNA in precisely timed patterns that regulate which 
genes are expressed at which times. During cloning, however, those patterns are 
not always reconstructed in exactly the same way. It's a bit like taking all 
the words in a novel, jumbling them up and then trying to re-create the 
original book, putting sentences, pages and chapters back in the right order. 
The chances of that happening with 100% accuracy are minuscule, which helps 
explain why cloning is so inefficient. Rudolf Jaenisch, a geneticist at the 
Massachusetts Institute of Technology, estimates that 4% to 5% of the genes in 
a cloned animal's genome are expressed incorrectly--probably because of faulty 
methylation. "If you reprogram, it affects the whole genome," he says. "From 
what we know, I would argue that cloned animals cannot be normal. They can be 
closer to normal, but not normal."

The mammalian body is surprisingly forgiving and can often compensate for minor 
programming errors. That's why some genetic changes in clones may not have any 
measurable functional effects on the animals.
Dolly seems to have been one of those lucky ones. She showed just two signs of 
her unusual provenance. One was the arthritis she developed at an early age. 
The other was shortened telomeres in her cells. Telomeres are bits of DNA that 
sit at the ends of chromosomes and serve as a biological clock chronicling a 
cell's age. In general, the shorter the telomeres, the older the cell. Dolly, a 
clone of a 6-year-old ewe, had cells whose telomeres were closer in length to 
those of her biological mother than to those of a baby lamb. We will never 
know, though, whether her shortened telomeres would have shortened her life. In 
2003 Wilmut and his team decided to put Dolly to sleep after she developed lung 
cancer caused by a viral infection common among sheep. An autopsy revealed that 
she was otherwise normal.

But the fact that clones have defects--however minor--only bolsters the 
arguments that scientists have made against human cloning. Based on his studies 
of the faults introduced by reprogramming, Jaenisch, for one, thinks human 
cloning is now out of the question. "I think we cannot make human reproductive 
cloning safe," he says. "And it's not a technological issue. It's a biological 
barrier. The pattern of methylation of a normal embryo cannot be re-created 
consistently in cloning."

But Jaenisch and Wilmut both see a role for cloning in treating human 
diseases--and perhaps someday conquering some of man's most intractable 
conditions. Wilmut and others have already created cow, sheep and pig cells 
genetically engineered to produce a particularly beneficial human protein, then 
cloned those cells to generate live animals able to make copious amounts of the 
target protein in their milk. It may be another 10 years or more before that 
approach yields anything safe and reliable enough to be used in real patients, 
and there is no guarantee that it will ever be successful. But as Wilmut points 
out, nobody thought Dolly was possible until she made history that warm July 
night 10 years ago.

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