Bonnie, I don't know this dataset very well myself, but I've forwarded your question to my colleagues who manage this.

I hope we can help you out with your query in the morning.

Regards,

Barry



On 24/02/13 21:30, Bonnie MacKellar wrote:

Hi,

I have a question about one of the example queries for the LinkedLifeData site. I am not sure if this is the right place to ask the question. If there is a better place, let me know.

This is one of the sample queries on the SPARQL query page:

SELECT ?drugname ?exclusion ?trial

WHERE {

    ?drug rdf:type drugbank:drugs .

    ?drug drugbank:possibleDiseaseTarget ?disease .

?disease diseasome-instance:class <http://www4.wiwiss.fu-berlin.de/diseasome/resource/diseaseClass/Respiratory> .

    ?drug skos:exactMatch ?intervention .

    ?intervention rdf:type linkedct:intervention .

    ?trial linkedct:intervention ?intervention .

    ?trial relationontology:hasExclusionCriteria ?exclusionCriteria .

    ?drug rdfs:label ?drugname .

    ?disease rdfs:label ?diseasename .

    ?intervention linkedct:description ?desc .

    ?trial linkedct:brief_title ?trialTitle .

    ?exclusionCriteria skos:prefLabel ?exclusion .

}

It does not work, because ?trial relationontology:hasExclusionCriteria ?exclusionCritera returns nothing. Exploring the data, I can see no evidence that LinkedCt resources contain this link. Am I doing something wrong? Is this something that was removed from LinkedLifeData? I see many references to similar queries in various presentations about LinkedLifeData, for example, here: http://www.ontotext.com/LLD-0.7

Does anyone know what this link was?

Thanks,

Bonnie MacKellar

[email protected]


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