We are pleased to announce the release of BioPortal 3.9. The major new features 
in this release are:
 
·         We have revised the search interface, both for specifying a search 
and in the format of the returned results. The new “advanced search” capability 
allows users to specify more clearly exactly what terms they would like to 
find. This capability also allows us to choose better (more commonly desired) 
defaults for the “basic search”. The returned search results are now grouped by 
ontology and the results are ranked so that terms from “better”  ontologies are 
returned first. We also show definitions for terms that have them. In general 
this response format was inspired by the Google search response interface so we 
hope that it looks familiar. We are specifically soliciting feedback from users 
on this revision. Please send any comments to [email protected].  *
 
·         We include the first version of the BioMixer visualization software 
(available through the “Visualize” links). This software replaces the older 
FlexViz system. There are a number of technology improvements (i.e. the removal 
of Flash technology) over the older system and the newer system is more 
powerful as well (i.e. you can now navigate mappings from the basic interface). 
More complete versions of BioMixer will be introduced in subsequent releases. 
Please provide any feedback you can on this new system. *
 
·         We have regenerated all automatically generated mappings in the 
system. These include lexical mappings, UMLS CUI mappings, identical identifier 
mappings, and OBO-xref mappings. We have also loaded mappings between selected 
UMLS ontologies as specified in the UMLS database (MRMAP).
 
*  This item was requested via the User Support mailing list. Thank you for 
your comments and suggestions!


Trish Whetzel, PhD
Outreach Coordinator
The National Center for Biomedical Ontology
Ph: 650-721-2378
http://www.bioontology.org

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