On Sep 11, 2008, at 6:44 AM, C. Titus Brown wrote:

>
> Hi, Namshin,
>
> Chris checked in a few patches of mine last night, and several of them
> had to do with caching.  One that almost certainly is affecting you is
> my removal of 'clear' from AnnotationDB -- it now returns an error, as
> it should, because AnnotationDB is a read-only database!  I think we
> should add a new function, 'clear_cache', which does what 'clear' used
> to do: remove the cached AnnotationDB objects.  How does that sound?

Your proposal matches what I proposed in May (tracker issue #6, 
http://code.google.com/p/pygr/issues/detail?id=6&can=7) 
  that we add a clear_cache() method as a standard across all database  
interface classes.  Let's implement it.

Regarding, Namshin's error report, I only pushed your changes to the  
public git repository around 8:30 pm last night, so it's not clear  
that his report is due to those changes.


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