Hi, Chris & Eden,
look over the projects here,
http://cartwheel.idyll.org/wiki/PygrGsoc2008Projects
and see if there's anything that interests you. A few projects that I
think are particularly ripe:
--
pygr.Data server Web interface to list available resources
Fix pickle (in)security. Signed pickles, e.g. with GPG? TrustedPickle?
prototype? See item #13 on mailing lilst posting, above.
Build tools & libraries to wrap/import a variety of alignment types and
larger data sets, e.g. CLUSTALW, blastz, LAGAN, ENSEMBL, etc. (#10 & 11
on mailing list post, above)
fast NLMSA joins (#4, #6)
Fast result filtering (#5)
--
Basically, I would suggest picking some things that you vaguely
understand or find interesting, googling about a bit to see what you can
figure out, and then posting again to the list, looking for a mentor.
You can also contact people privately, off-list, but that's riskier --
the deadline is soon and people are randomly busy & non-responsive...
cheers,
--titus
--
C. Titus Brown, c...@msu.edu
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