On May 25, 2009, at 8:06 PM, C. Titus Brown wrote:

> Sixth, I forgot to update my pygr version (I was working in an old
> branch, sigh) and ran across the multirecord blast parsing bug that
> Chris fixed a bit ago.  Was a test case entered for this?
>
> http://github.com/cjlee112/pygr/commit/001a66af4c658649f1570f953b5ad61923e43414
>
> It doesn't seem like it.  I'm worried about changes like that, and  
> this,
>
> http://github.com/cjlee112/pygr/commit/f26f444309b0af932e4937714b5b23e8865f072d
>
> both of which fix bugs that should have been caught by our test
> framework, but weren't; then, when they were fixed, no test was
> entered.  I'm sympathetic to the need to maintain momentum but Here Be
> Dragons... this is a bad way to move forward IMO.

Hi Titus,
Marek had development ongoing on new blast tests when I fixed this  
bug, so I asked him to add the test case to his branch.  If I added it  
myself, our changes to the blast_test.py test code would clash and  
could not be merged cleanly by git.  The bug fix was made on the  
master branch, but Marek's experimental branch is still ongoing.  When  
he tells me it's ready to push, I'll do so right away.

Thanks for being vigilant!!

-- Chris

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