On Wed, May 27, 2009 at 06:59:24PM -0700, Christopher Lee wrote: -> On May 27, 2009, at 6:47 PM, C. Titus Brown wrote: -> -> > Quick comment -- how about using just a regular module-level function, -> > instead of a class method, for creating NLMSAs with specialized data -> > formats? -> -> Sure, that is also possible. But regardless of whether you use a -> class method or a function, it seems like users would want to be able -> to code such things *outside* the cnestedlist.pyx file, in their own -> Pyrex module file. I think part of the "monolithic" quality of NLMSA -> is that we have been obligated to put everything in one file. For -> example, even in a pure Python case, disaggregating seqdb into -> separate pieces for annotation and blast has felt like a valuable -> simplification / modularization.
Right, gotcha. Do you remember what the obstacle was to splitting things into multiple .pyx files? --titus -- C. Titus Brown, c...@msu.edu --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "pygr-dev" group. To post to this group, send email to pygr-dev@googlegroups.com To unsubscribe from this group, send email to pygr-dev+unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/pygr-dev?hl=en -~----------~----~----~----~------~----~------~--~---
