We're just trying to build some annotation objects of a very general nature (Genes, AlignedESTs, AlignedShortReads) and the documentation seems to suggest these classes have to be created de novo (via subclassing ItemClass), and for example the mappings of exons to genes also has to be explicitly created.
Since I doubt we are the first to want to work with these types of objects, I was wondering what is already out there floating around in terms of existing clases and/or creation scripts. thx, --David David M. Goodstein Joint Genome Institute / Lawrence Berkeley National Lab Center for Integrative Genomics / UCBerkeley http://www.phytozome.net --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "pygr-dev" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/pygr-dev?hl=en -~----------~----~----~----~------~----~------~--~---
