On Tue, 26 Mar 2002, Nat Echols wrote: > Is there any way to color by secondary structure? I know of other
It's a snap: # first, load a structure with defined SS load $PYMOL_PATH/test/dat/1tii.pdb hide show cartoon # now color color green color red,ss h color yellow,ss l set cartoon_discrete_colors=1 NOTE: the last command turns off color annoying color blending between secondary structure elements. Cheers, Warren