Hello all, I don't know whether this has been covered before but I have some questions on clipping whilst using surfaces. Before I go on I will state that pymol produces the best surfaces for my purposes, of any program I have seen so far. However, (sorry there is always room to be better! ;) ) the ideal situation would be if the cut "surface" was represented as if the molecule was solid. ie: you didn't see inside the molecule itself, but the cut plane. Is there any way to do this (e.g. via povray rendering)? I appreciate it is probably not exactly easy though.
Alternatively, it would be good if it was possible to make the inside surface of a molecule appear completely black without resorting to ambient=0. Any ideas? Tim