Serge, * Serge Cohen <co...@embl-grenoble.fr> [2002-10-02 16:10] wrote: > Title says it all... > > Is it possible to draw a protein (back-bone, cartoon, sticks...) with a > colouring scheme according to the crystallographic B-factor of each > atoms?
I have a color_b.py python script on my PyMOL web page that you can use. it has a number of options including the selection and two types of colouring schemes (rainbow versus a blue-magenta-red gradient) and two types of binning of the colours (equal number of atoms in each colour or equal spacing of colours along the B-factor range). See http://biophysics.med.jhmi.edu/rlc/work/pymol to download. There are other scripts there as well. Cheers, Robert -- Robert L. Campbell, Ph.D. http://biophysics.med.jhmi.edu/rlc r...@k2.med.jhmi.edu phone: 410-614-6313 Research Specialist/X-ray Facility Manager HHMI/Dept. of Biophysics & Biophysical Chem., The Johns Hopkins University PGP Fingerprint: 9B49 3D3F A489 05DC B35C 8E33 F238 A8F5 F635 C0E2
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